Hb_000792_120

Information

Type -
Description -
Location Contig792: 164789-167993
Sequence    

Annotation

kegg
ID pop:POPTR_0006s09660g
description POPTRDRAFT_560866; UNCOUPLING family protein
nr
ID XP_012087936.1
description PREDICTED: mitochondrial uncoupling protein 1 isoform X2 [Jatropha curcas]
swissprot
ID O81845
description Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1
trembl
ID A0A067JWW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25064 PE=3 SV=1
Gene Ontology
ID GO:0005774
description mitochondrial uncoupling protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000792_120 0.0 - - PREDICTED: mitochondrial uncoupling protein 1 isoform X2 [Jatropha curcas]
2 Hb_012022_100 0.1374428547 - - CPRD49 family protein [Populus trichocarpa]
3 Hb_001579_140 0.1395927911 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 isoform X2 [Jatropha curcas]
4 Hb_000300_210 0.1516693308 - - gd2b, putative [Ricinus communis]
5 Hb_000329_660 0.1606299333 - - PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic [Jatropha curcas]
6 Hb_000387_060 0.164560541 - - -
7 Hb_008066_030 0.1700888797 - - PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
8 Hb_003226_240 0.1702264422 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
9 Hb_002043_120 0.1707194566 - - protein with unknown function [Ricinus communis]
10 Hb_000453_300 0.1713111736 - - latex cystatin [Hevea brasiliensis]
11 Hb_128524_010 0.17613655 - - PREDICTED: polyadenylate-binding protein 7 isoform X1 [Jatropha curcas]
12 Hb_003211_050 0.176619922 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
13 Hb_000235_010 0.1779435283 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
14 Hb_000613_160 0.1792919455 - - coated vesicle membrane protein, putative [Ricinus communis]
15 Hb_001433_100 0.1821349374 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
16 Hb_168711_010 0.182242152 - - PREDICTED: (DL)-glycerol-3-phosphatase 2 [Sesamum indicum]
17 Hb_000032_350 0.1878043172 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001373_100 0.1901895447 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001186_080 0.198390502 - - PREDICTED: F-box protein FBW2-like [Nelumbo nucifera]
20 Hb_001425_110 0.1987737204 - - hypothetical protein Csa_6G106200 [Cucumis sativus]

Gene co-expression network

sample Hb_000792_120 Hb_000792_120 Hb_012022_100 Hb_012022_100 Hb_000792_120--Hb_012022_100 Hb_001579_140 Hb_001579_140 Hb_000792_120--Hb_001579_140 Hb_000300_210 Hb_000300_210 Hb_000792_120--Hb_000300_210 Hb_000329_660 Hb_000329_660 Hb_000792_120--Hb_000329_660 Hb_000387_060 Hb_000387_060 Hb_000792_120--Hb_000387_060 Hb_008066_030 Hb_008066_030 Hb_000792_120--Hb_008066_030 Hb_002043_120 Hb_002043_120 Hb_012022_100--Hb_002043_120 Hb_002704_050 Hb_002704_050 Hb_012022_100--Hb_002704_050 Hb_003226_240 Hb_003226_240 Hb_012022_100--Hb_003226_240 Hb_012022_100--Hb_000329_660 Hb_001373_100 Hb_001373_100 Hb_012022_100--Hb_001373_100 Hb_000613_160 Hb_000613_160 Hb_001579_140--Hb_000613_160 Hb_012239_100 Hb_012239_100 Hb_001579_140--Hb_012239_100 Hb_005000_160 Hb_005000_160 Hb_001579_140--Hb_005000_160 Hb_009838_040 Hb_009838_040 Hb_001579_140--Hb_009838_040 Hb_000749_240 Hb_000749_240 Hb_001579_140--Hb_000749_240 Hb_001433_100 Hb_001433_100 Hb_000300_210--Hb_001433_100 Hb_032202_250 Hb_032202_250 Hb_000300_210--Hb_032202_250 Hb_000300_210--Hb_003226_240 Hb_001425_110 Hb_001425_110 Hb_000300_210--Hb_001425_110 Hb_000300_210--Hb_000329_660 Hb_003211_050 Hb_003211_050 Hb_000329_660--Hb_003211_050 Hb_000329_660--Hb_001373_100 Hb_000329_660--Hb_000387_060 Hb_000329_660--Hb_003226_240 Hb_001276_060 Hb_001276_060 Hb_000329_660--Hb_001276_060 Hb_000387_060--Hb_003211_050 Hb_032660_020 Hb_032660_020 Hb_000387_060--Hb_032660_020 Hb_000714_010 Hb_000714_010 Hb_000387_060--Hb_000714_010 Hb_000387_060--Hb_001425_110 Hb_000979_250 Hb_000979_250 Hb_008066_030--Hb_000979_250 Hb_003198_010 Hb_003198_010 Hb_008066_030--Hb_003198_010 Hb_004567_020 Hb_004567_020 Hb_008066_030--Hb_004567_020 Hb_008066_030--Hb_001433_100 Hb_008066_030--Hb_000300_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.415534 0.12708 0.521561 0.212663 0.13085 0.135406
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.91491 8.23046 2.47555 0.762065 0

CAGE analysis