Hb_170426_010

Information

Type -
Description -
Location Contig170426: 2109-2744
Sequence    

Annotation

kegg
ID brp:103867615
description cytochrome b5 isoform B-like
nr
ID AAT84459.1
description cytochrome b5 isoform Cb5-B [Vernicia fordii]
swissprot
ID O48845
description Cytochrome b5 isoform B OS=Arabidopsis thaliana GN=CYTB5-B PE=1 SV=1
trembl
ID Q5V9L3
description Cytochrome b5 isoform Cb5-B OS=Vernicia fordii PE=2 SV=1
Gene Ontology
ID GO:0005789
description cytochrome b5 isoform b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170426_010 0.0 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]
2 Hb_004679_060 0.1256804833 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004089_020 0.1374627411 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
4 Hb_004787_040 0.1392533972 - - conserved hypothetical protein [Ricinus communis]
5 Hb_020805_060 0.1493610804 - - PREDICTED: protein S-acyltransferase 21 [Jatropha curcas]
6 Hb_000189_540 0.1638645589 - - PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Jatropha curcas]
7 Hb_000011_300 0.1683040563 - - PREDICTED: proteasome subunit alpha type-5 isoform X1 [Gossypium raimondii]
8 Hb_002309_050 0.1693975983 - - beta-carotene hydroxylase, putative [Ricinus communis]
9 Hb_000739_140 0.1919527934 - - PREDICTED: proteasome subunit beta type-1 [Jatropha curcas]
10 Hb_000270_740 0.1940420666 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
11 Hb_000352_200 0.1981193423 - - PREDICTED: OTU domain-containing protein DDB_G0284757 isoform X1 [Jatropha curcas]
12 Hb_000155_090 0.1985761234 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
13 Hb_012022_140 0.2040812771 - - ADP,ATP carrier protein, putative [Ricinus communis]
14 Hb_002768_090 0.2046093543 - - PREDICTED: transcription initiation factor TFIID subunit 11 [Jatropha curcas]
15 Hb_005054_260 0.2061235494 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A [Jatropha curcas]
16 Hb_001059_120 0.2065061004 - - NADH dehydrogenase, putative [Ricinus communis]
17 Hb_009075_010 0.2066147608 - - 60S ribosomal protein L10B [Hevea brasiliensis]
18 Hb_000771_060 0.2073866086 - - PREDICTED: spermine synthase [Jatropha curcas]
19 Hb_001449_100 0.2086516156 - - PREDICTED: transcription factor bHLH149 [Jatropha curcas]
20 Hb_007441_240 0.2092358609 - - ethphon-induced protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_170426_010 Hb_170426_010 Hb_004679_060 Hb_004679_060 Hb_170426_010--Hb_004679_060 Hb_004089_020 Hb_004089_020 Hb_170426_010--Hb_004089_020 Hb_004787_040 Hb_004787_040 Hb_170426_010--Hb_004787_040 Hb_020805_060 Hb_020805_060 Hb_170426_010--Hb_020805_060 Hb_000189_540 Hb_000189_540 Hb_170426_010--Hb_000189_540 Hb_000011_300 Hb_000011_300 Hb_170426_010--Hb_000011_300 Hb_001449_100 Hb_001449_100 Hb_004679_060--Hb_001449_100 Hb_007313_080 Hb_007313_080 Hb_004679_060--Hb_007313_080 Hb_004679_060--Hb_000189_540 Hb_004679_060--Hb_020805_060 Hb_004679_060--Hb_004787_040 Hb_012022_140 Hb_012022_140 Hb_004089_020--Hb_012022_140 Hb_000815_290 Hb_000815_290 Hb_004089_020--Hb_000815_290 Hb_000739_140 Hb_000739_140 Hb_004089_020--Hb_000739_140 Hb_005054_260 Hb_005054_260 Hb_004089_020--Hb_005054_260 Hb_000005_300 Hb_000005_300 Hb_004089_020--Hb_000005_300 Hb_002309_050 Hb_002309_050 Hb_004787_040--Hb_002309_050 Hb_000270_740 Hb_000270_740 Hb_004787_040--Hb_000270_740 Hb_004787_040--Hb_020805_060 Hb_004787_040--Hb_000189_540 Hb_000768_140 Hb_000768_140 Hb_020805_060--Hb_000768_140 Hb_001164_030 Hb_001164_030 Hb_020805_060--Hb_001164_030 Hb_020805_060--Hb_000011_300 Hb_020805_060--Hb_000189_540 Hb_001322_070 Hb_001322_070 Hb_000189_540--Hb_001322_070 Hb_002686_180 Hb_002686_180 Hb_000189_540--Hb_002686_180 Hb_098315_020 Hb_098315_020 Hb_000189_540--Hb_098315_020 Hb_000155_090 Hb_000155_090 Hb_000189_540--Hb_000155_090 Hb_000152_210 Hb_000152_210 Hb_000189_540--Hb_000152_210 Hb_000011_300--Hb_000189_540 Hb_000291_270 Hb_000291_270 Hb_000011_300--Hb_000291_270 Hb_000011_300--Hb_004089_020 Hb_000011_300--Hb_000005_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.47689 31.8798 121.876 102.668 1.46256 2.34566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.983 339.782 79.4469 76.3041 50.3092

CAGE analysis