Hb_146901_010

Information

Type -
Description -
Location Contig146901: 2050-5193
Sequence    

Annotation

kegg
ID tcc:TCM_020424
description LRR receptor-like serine/threonine-protein kinase, putative
nr
ID XP_007034489.1
description LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A061EK41
description LRR receptor-like serine/threonine-protein kinase, putative OS=Theobroma cacao GN=TCM_020424 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146901_010 0.0 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
2 Hb_000162_200 0.1068312866 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
3 Hb_119066_010 0.1128832548 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
4 Hb_010557_020 0.1153047208 - - Mlo protein [Hevea brasiliensis]
5 Hb_002635_020 0.1184615872 - - hypothetical protein POPTR_0018s09790g [Populus trichocarpa]
6 Hb_004162_320 0.1191114435 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
7 Hb_001883_010 0.1198626064 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
8 Hb_002078_320 0.121703899 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
9 Hb_032695_010 0.1217144099 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
10 Hb_017358_020 0.1246498993 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
11 Hb_000868_130 0.1261107307 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
12 Hb_001417_060 0.1274671741 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_003506_010 0.1290558995 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
14 Hb_020805_070 0.1294832532 - - PREDICTED: MLO protein homolog 1-like [Jatropha curcas]
15 Hb_001046_030 0.1303007026 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_004607_160 0.1305228067 - - PREDICTED: uncharacterized protein LOC105134931 [Populus euphratica]
17 Hb_000932_060 0.1341520264 - - conserved hypothetical protein [Ricinus communis]
18 Hb_070136_010 0.1359567197 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
19 Hb_144449_010 0.1370008565 - - Potassium transporter, putative [Ricinus communis]
20 Hb_000473_100 0.1383373707 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]

Gene co-expression network

sample Hb_146901_010 Hb_146901_010 Hb_000162_200 Hb_000162_200 Hb_146901_010--Hb_000162_200 Hb_119066_010 Hb_119066_010 Hb_146901_010--Hb_119066_010 Hb_010557_020 Hb_010557_020 Hb_146901_010--Hb_010557_020 Hb_002635_020 Hb_002635_020 Hb_146901_010--Hb_002635_020 Hb_004162_320 Hb_004162_320 Hb_146901_010--Hb_004162_320 Hb_001883_010 Hb_001883_010 Hb_146901_010--Hb_001883_010 Hb_000318_010 Hb_000318_010 Hb_000162_200--Hb_000318_010 Hb_003506_010 Hb_003506_010 Hb_000162_200--Hb_003506_010 Hb_000162_200--Hb_004162_320 Hb_000977_030 Hb_000977_030 Hb_000162_200--Hb_000977_030 Hb_005892_040 Hb_005892_040 Hb_000162_200--Hb_005892_040 Hb_007894_080 Hb_007894_080 Hb_000162_200--Hb_007894_080 Hb_070136_010 Hb_070136_010 Hb_119066_010--Hb_070136_010 Hb_002871_110 Hb_002871_110 Hb_119066_010--Hb_002871_110 Hb_006970_170 Hb_006970_170 Hb_119066_010--Hb_006970_170 Hb_002078_320 Hb_002078_320 Hb_119066_010--Hb_002078_320 Hb_119066_010--Hb_002635_020 Hb_000290_030 Hb_000290_030 Hb_010557_020--Hb_000290_030 Hb_000856_200 Hb_000856_200 Hb_010557_020--Hb_000856_200 Hb_010222_040 Hb_010222_040 Hb_010557_020--Hb_010222_040 Hb_144449_010 Hb_144449_010 Hb_010557_020--Hb_144449_010 Hb_000473_100 Hb_000473_100 Hb_010557_020--Hb_000473_100 Hb_010557_020--Hb_000162_200 Hb_002601_140 Hb_002601_140 Hb_002635_020--Hb_002601_140 Hb_000922_160 Hb_000922_160 Hb_002635_020--Hb_000922_160 Hb_002635_020--Hb_002078_320 Hb_002635_020--Hb_000162_200 Hb_002635_020--Hb_004162_320 Hb_002635_020--Hb_003506_010 Hb_004162_320--Hb_003506_010 Hb_004162_320--Hb_005892_040 Hb_020805_070 Hb_020805_070 Hb_004162_320--Hb_020805_070 Hb_004162_320--Hb_002078_320 Hb_001405_040 Hb_001405_040 Hb_004162_320--Hb_001405_040 Hb_001579_060 Hb_001579_060 Hb_001883_010--Hb_001579_060 Hb_032695_010 Hb_032695_010 Hb_001883_010--Hb_032695_010 Hb_000694_050 Hb_000694_050 Hb_001883_010--Hb_000694_050 Hb_000680_130 Hb_000680_130 Hb_001883_010--Hb_000680_130 Hb_000025_590 Hb_000025_590 Hb_001883_010--Hb_000025_590 Hb_006827_030 Hb_006827_030 Hb_001883_010--Hb_006827_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0818737 0.165744 0.17755 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0142722 0 0 0.102446 0.215726

CAGE analysis