Hb_120762_010

Information

Type -
Description -
Location Contig120762: 97-912
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120762_010 0.0 - - -
2 Hb_034482_030 0.116409578 - - PREDICTED: histidine--tRNA ligase [Jatropha curcas]
3 Hb_001213_130 0.1503656368 - - PREDICTED: fructokinase-like 1, chloroplastic [Jatropha curcas]
4 Hb_004398_030 0.1596928916 - - PREDICTED: chloroplast processing peptidase [Jatropha curcas]
5 Hb_000056_040 0.1647890736 - - PREDICTED: protein IQ-DOMAIN 31 [Jatropha curcas]
6 Hb_000362_020 0.1676848213 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
7 Hb_006111_070 0.1718787547 - - hypothetical protein POPTR_0008s07660g [Populus trichocarpa]
8 Hb_001638_290 0.1724463164 rubber biosynthesis Gene Name: Pyruvate dehydrogenase pyruvate dehydrogenase, putative [Ricinus communis]
9 Hb_030312_080 0.1735818009 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]
10 Hb_000540_130 0.1756143261 transcription factor TF Family: Pseudo ARR-B sensory transduction histidine kinase, putative [Ricinus communis]
11 Hb_004884_070 0.1761936214 - - PREDICTED: ethylene-overproduction protein 1 [Jatropha curcas]
12 Hb_000062_150 0.1768163986 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
13 Hb_000983_160 0.1776201215 - - hypothetical protein B456_009G199800 [Gossypium raimondii]
14 Hb_001604_120 0.1782746125 - - PREDICTED: hemK methyltransferase family member 1 isoform X2 [Jatropha curcas]
15 Hb_001975_090 0.1805857068 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
16 Hb_008695_020 0.1839919199 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
17 Hb_000080_120 0.1923276855 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Jatropha curcas]
18 Hb_000849_020 0.1934446326 - - PREDICTED: uncharacterized protein LOC105644228 isoform X1 [Jatropha curcas]
19 Hb_000363_460 0.1937144093 - - PREDICTED: grpE protein homolog, mitochondrial isoform X1 [Jatropha curcas]
20 Hb_024570_010 0.194768255 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]

Gene co-expression network

sample Hb_120762_010 Hb_120762_010 Hb_034482_030 Hb_034482_030 Hb_120762_010--Hb_034482_030 Hb_001213_130 Hb_001213_130 Hb_120762_010--Hb_001213_130 Hb_004398_030 Hb_004398_030 Hb_120762_010--Hb_004398_030 Hb_000056_040 Hb_000056_040 Hb_120762_010--Hb_000056_040 Hb_000362_020 Hb_000362_020 Hb_120762_010--Hb_000362_020 Hb_006111_070 Hb_006111_070 Hb_120762_010--Hb_006111_070 Hb_001638_290 Hb_001638_290 Hb_034482_030--Hb_001638_290 Hb_034482_030--Hb_000056_040 Hb_008695_020 Hb_008695_020 Hb_034482_030--Hb_008695_020 Hb_000076_130 Hb_000076_130 Hb_034482_030--Hb_000076_130 Hb_034482_030--Hb_001213_130 Hb_001652_080 Hb_001652_080 Hb_001213_130--Hb_001652_080 Hb_000963_130 Hb_000963_130 Hb_001213_130--Hb_000963_130 Hb_000390_310 Hb_000390_310 Hb_001213_130--Hb_000390_310 Hb_000076_260 Hb_000076_260 Hb_001213_130--Hb_000076_260 Hb_032202_230 Hb_032202_230 Hb_001213_130--Hb_032202_230 Hb_000077_010 Hb_000077_010 Hb_001213_130--Hb_000077_010 Hb_001975_090 Hb_001975_090 Hb_004398_030--Hb_001975_090 Hb_007803_030 Hb_007803_030 Hb_004398_030--Hb_007803_030 Hb_006816_180 Hb_006816_180 Hb_004398_030--Hb_006816_180 Hb_000135_030 Hb_000135_030 Hb_004398_030--Hb_000135_030 Hb_000181_240 Hb_000181_240 Hb_004398_030--Hb_000181_240 Hb_000627_250 Hb_000627_250 Hb_004398_030--Hb_000627_250 Hb_000300_690 Hb_000300_690 Hb_000056_040--Hb_000300_690 Hb_004369_020 Hb_004369_020 Hb_000056_040--Hb_004369_020 Hb_004884_070 Hb_004884_070 Hb_000056_040--Hb_004884_070 Hb_001450_050 Hb_001450_050 Hb_000056_040--Hb_001450_050 Hb_000599_180 Hb_000599_180 Hb_000056_040--Hb_000599_180 Hb_000056_040--Hb_001638_290 Hb_000362_020--Hb_034482_030 Hb_000362_020--Hb_001638_290 Hb_005672_020 Hb_005672_020 Hb_000362_020--Hb_005672_020 Hb_000362_020--Hb_004398_030 Hb_000984_270 Hb_000984_270 Hb_000362_020--Hb_000984_270 Hb_015884_030 Hb_015884_030 Hb_006111_070--Hb_015884_030 Hb_000463_140 Hb_000463_140 Hb_006111_070--Hb_000463_140 Hb_000062_150 Hb_000062_150 Hb_006111_070--Hb_000062_150 Hb_024570_010 Hb_024570_010 Hb_006111_070--Hb_024570_010 Hb_012799_030 Hb_012799_030 Hb_006111_070--Hb_012799_030 Hb_000313_060 Hb_000313_060 Hb_006111_070--Hb_000313_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.1664 0.307966 1.23522 0.254973 1.48969 0.679303
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.360379 0.283059 1.1507 0.180216 1.26539

CAGE analysis