Hb_000062_150

Information

Type -
Description -
Location Contig62: 119219-121103
Sequence    

Annotation

kegg
ID rcu:RCOM_1082400
description catalytic, putative
nr
ID XP_012085596.1
description PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
swissprot
ID Q9LK21
description Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1
trembl
ID A0A067K3D1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17898 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51419: 120785-121111
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_150 0.0 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
2 Hb_000173_230 0.1106060238 - - PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Jatropha curcas]
3 Hb_006111_070 0.1356291625 - - hypothetical protein POPTR_0008s07660g [Populus trichocarpa]
4 Hb_188279_010 0.1409817989 - - PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like [Tarenaya hassleriana]
5 Hb_000056_040 0.1502927459 - - PREDICTED: protein IQ-DOMAIN 31 [Jatropha curcas]
6 Hb_001221_170 0.1517864831 - - PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Jatropha curcas]
7 Hb_006371_010 0.1564134742 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
8 Hb_007632_220 0.1583177459 - - RNA-binding protein, putative [Ricinus communis]
9 Hb_013405_030 0.1606228219 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007545_030 0.1610254841 - - conserved hypothetical protein [Ricinus communis]
11 Hb_012799_030 0.1616859184 - - PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Jatropha curcas]
12 Hb_008247_010 0.1616860774 - - PREDICTED: leucine--tRNA ligase, cytoplasmic [Jatropha curcas]
13 Hb_000041_150 0.1619076209 - - Stachyose synthase precursor, putative [Ricinus communis]
14 Hb_024570_010 0.1623956574 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
15 Hb_002025_200 0.1638803269 - - -
16 Hb_034482_030 0.1639962592 - - PREDICTED: histidine--tRNA ligase [Jatropha curcas]
17 Hb_001450_050 0.166170315 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001245_070 0.166254268 - - PREDICTED: uncharacterized protein LOC105633557 [Jatropha curcas]
19 Hb_022250_170 0.1667736219 - - PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Populus euphratica]
20 Hb_015884_030 0.1689262776 - - PREDICTED: uncharacterized protein LOC105647778 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000062_150 Hb_000062_150 Hb_000173_230 Hb_000173_230 Hb_000062_150--Hb_000173_230 Hb_006111_070 Hb_006111_070 Hb_000062_150--Hb_006111_070 Hb_188279_010 Hb_188279_010 Hb_000062_150--Hb_188279_010 Hb_000056_040 Hb_000056_040 Hb_000062_150--Hb_000056_040 Hb_001221_170 Hb_001221_170 Hb_000062_150--Hb_001221_170 Hb_006371_010 Hb_006371_010 Hb_000062_150--Hb_006371_010 Hb_000173_230--Hb_188279_010 Hb_009048_040 Hb_009048_040 Hb_000173_230--Hb_009048_040 Hb_000934_270 Hb_000934_270 Hb_000173_230--Hb_000934_270 Hb_001675_180 Hb_001675_180 Hb_000173_230--Hb_001675_180 Hb_085781_010 Hb_085781_010 Hb_000173_230--Hb_085781_010 Hb_013405_030 Hb_013405_030 Hb_000173_230--Hb_013405_030 Hb_015884_030 Hb_015884_030 Hb_006111_070--Hb_015884_030 Hb_000463_140 Hb_000463_140 Hb_006111_070--Hb_000463_140 Hb_024570_010 Hb_024570_010 Hb_006111_070--Hb_024570_010 Hb_012799_030 Hb_012799_030 Hb_006111_070--Hb_012799_030 Hb_000313_060 Hb_000313_060 Hb_006111_070--Hb_000313_060 Hb_001847_020 Hb_001847_020 Hb_188279_010--Hb_001847_020 Hb_003683_160 Hb_003683_160 Hb_188279_010--Hb_003683_160 Hb_007317_210 Hb_007317_210 Hb_188279_010--Hb_007317_210 Hb_011571_010 Hb_011571_010 Hb_188279_010--Hb_011571_010 Hb_188279_010--Hb_009048_040 Hb_000300_690 Hb_000300_690 Hb_000056_040--Hb_000300_690 Hb_004369_020 Hb_004369_020 Hb_000056_040--Hb_004369_020 Hb_004884_070 Hb_004884_070 Hb_000056_040--Hb_004884_070 Hb_001450_050 Hb_001450_050 Hb_000056_040--Hb_001450_050 Hb_000599_180 Hb_000599_180 Hb_000056_040--Hb_000599_180 Hb_001638_290 Hb_001638_290 Hb_000056_040--Hb_001638_290 Hb_019654_100 Hb_019654_100 Hb_001221_170--Hb_019654_100 Hb_153258_010 Hb_153258_010 Hb_001221_170--Hb_153258_010 Hb_010795_010 Hb_010795_010 Hb_001221_170--Hb_010795_010 Hb_000041_150 Hb_000041_150 Hb_001221_170--Hb_000041_150 Hb_003862_050 Hb_003862_050 Hb_001221_170--Hb_003862_050 Hb_001245_070 Hb_001245_070 Hb_001221_170--Hb_001245_070 Hb_002025_200 Hb_002025_200 Hb_006371_010--Hb_002025_200 Hb_007632_220 Hb_007632_220 Hb_006371_010--Hb_007632_220 Hb_000316_050 Hb_000316_050 Hb_006371_010--Hb_000316_050 Hb_000505_010 Hb_000505_010 Hb_006371_010--Hb_000505_010 Hb_006371_010--Hb_000173_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.50733 1.27585 2.01067 1.07429 4.02567 3.73815
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.02588 2.42034 6.47473 0.993766 4.18778

CAGE analysis