Hb_114151_020

Information

Type -
Description -
Location Contig114151: 20416-39170
Sequence    

Annotation

kegg
ID rcu:RCOM_0482810
description alpha-glucan water dikinase, chloroplast precursor, putative (EC:2.7.9.4)
nr
ID AFO83530.1
description glucan water dikinase 2 [Manihot esculenta]
swissprot
ID Q9STV0
description Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3
trembl
ID V9K6M5
description Glucan water dikinase 2 OS=Manihot esculenta GN=GWD2 PE=2 SV=1
Gene Ontology
ID GO:0009941
description alpha-glucan water dikinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04299: 20926-24435 , PASA_asmbl_04300: 24487-25271 , PASA_asmbl_04301: 25776-26623 , PASA_asmbl_04302: 28011-28244 , PASA_asmbl_04303: 29681-30228 , PASA_asmbl_04304: 38287-38901 , PASA_asmbl_04305: 37846-39110
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114151_020 0.0 - - glucan water dikinase 2 [Manihot esculenta]
2 Hb_006031_010 0.082465016 - - PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Jatropha curcas]
3 Hb_000035_010 0.0851648499 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR12-like isoform X1 [Jatropha curcas]
4 Hb_000189_320 0.0851719044 - - PREDICTED: multisubstrate pseudouridine synthase 7 isoform X2 [Jatropha curcas]
5 Hb_009486_090 0.0862479987 - - RNA binding protein, putative [Ricinus communis]
6 Hb_000196_060 0.0875776307 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
7 Hb_004327_040 0.0882903616 - - PREDICTED: tetratricopeptide repeat protein 27 homolog [Jatropha curcas]
8 Hb_000363_300 0.0902583151 - - PREDICTED: protein ENHANCED DOWNY MILDEW 2 isoform X1 [Jatropha curcas]
9 Hb_000568_050 0.0931813359 - - PREDICTED: endoplasmic reticulum metallopeptidase 1 isoform X2 [Jatropha curcas]
10 Hb_011174_020 0.0932089698 - - PREDICTED: uncharacterized protein LOC105632610 [Jatropha curcas]
11 Hb_002805_210 0.0938278481 transcription factor TF Family: SNF2 Chromodomain-helicase-DNA-binding 2 [Gossypium arboreum]
12 Hb_003849_280 0.0941720221 - - PREDICTED: uncharacterized protein LOC105644977 [Jatropha curcas]
13 Hb_011485_060 0.0961271737 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 3 [Jatropha curcas]
14 Hb_000950_060 0.0972752851 - - PREDICTED: CCAAT/enhancer-binding protein zeta [Jatropha curcas]
15 Hb_002213_020 0.0978825441 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
16 Hb_004143_160 0.0999577946 - - SAB, putative [Ricinus communis]
17 Hb_001726_100 0.10044071 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 19 isoform X2 [Jatropha curcas]
18 Hb_001124_050 0.1008853753 transcription factor TF Family: SNF2 PREDICTED: chromatin structure-remodeling complex protein SYD-like [Jatropha curcas]
19 Hb_012244_020 0.102489226 - - calpain, putative [Ricinus communis]
20 Hb_001377_100 0.103532844 - - PREDICTED: uncharacterized protein LOC105642863 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_114151_020 Hb_114151_020 Hb_006031_010 Hb_006031_010 Hb_114151_020--Hb_006031_010 Hb_000035_010 Hb_000035_010 Hb_114151_020--Hb_000035_010 Hb_000189_320 Hb_000189_320 Hb_114151_020--Hb_000189_320 Hb_009486_090 Hb_009486_090 Hb_114151_020--Hb_009486_090 Hb_000196_060 Hb_000196_060 Hb_114151_020--Hb_000196_060 Hb_004327_040 Hb_004327_040 Hb_114151_020--Hb_004327_040 Hb_006031_010--Hb_009486_090 Hb_002007_110 Hb_002007_110 Hb_006031_010--Hb_002007_110 Hb_012244_020 Hb_012244_020 Hb_006031_010--Hb_012244_020 Hb_001377_100 Hb_001377_100 Hb_006031_010--Hb_001377_100 Hb_001951_170 Hb_001951_170 Hb_006031_010--Hb_001951_170 Hb_123531_010 Hb_123531_010 Hb_006031_010--Hb_123531_010 Hb_000049_250 Hb_000049_250 Hb_000035_010--Hb_000049_250 Hb_000175_120 Hb_000175_120 Hb_000035_010--Hb_000175_120 Hb_000035_010--Hb_009486_090 Hb_000035_010--Hb_006031_010 Hb_000950_060 Hb_000950_060 Hb_000035_010--Hb_000950_060 Hb_000189_320--Hb_004327_040 Hb_003117_030 Hb_003117_030 Hb_000189_320--Hb_003117_030 Hb_003734_010 Hb_003734_010 Hb_000189_320--Hb_003734_010 Hb_008387_020 Hb_008387_020 Hb_000189_320--Hb_008387_020 Hb_000011_270 Hb_000011_270 Hb_000189_320--Hb_000011_270 Hb_000568_050 Hb_000568_050 Hb_000189_320--Hb_000568_050 Hb_009486_090--Hb_001377_100 Hb_001124_050 Hb_001124_050 Hb_009486_090--Hb_001124_050 Hb_009486_090--Hb_000196_060 Hb_009486_090--Hb_001951_170 Hb_009486_170 Hb_009486_170 Hb_009486_090--Hb_009486_170 Hb_002391_050 Hb_002391_050 Hb_000196_060--Hb_002391_050 Hb_000196_060--Hb_001377_100 Hb_000925_090 Hb_000925_090 Hb_000196_060--Hb_000925_090 Hb_000196_060--Hb_006031_010 Hb_011174_020 Hb_011174_020 Hb_000196_060--Hb_011174_020 Hb_004327_040--Hb_003734_010 Hb_012760_100 Hb_012760_100 Hb_004327_040--Hb_012760_100 Hb_000025_710 Hb_000025_710 Hb_004327_040--Hb_000025_710 Hb_004327_040--Hb_011174_020 Hb_001925_060 Hb_001925_060 Hb_004327_040--Hb_001925_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.93744 3.57557 1.64974 2.48463 1.52233 2.89361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.44644 1.60149 1.01114 4.83348 5.20366

CAGE analysis