Hb_099448_010

Information

Type -
Description -
Location Contig99448: 67-675
Sequence    

Annotation

kegg
ID pop:POPTR_0017s01630g
description hypothetical protein
nr
ID XP_012086247.1
description PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
swissprot
ID Q7XA39
description Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
trembl
ID A0A067JPZ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21064 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099448_010 0.0 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
2 Hb_001660_010 0.1566561028 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001348_220 0.1810659258 - - PREDICTED: defensin Ec-AMP-D2-like [Nelumbo nucifera]
4 Hb_095532_010 0.233169422 - - BnaC05g27570D [Brassica napus]
5 Hb_000565_010 0.2353022593 - - hypothetical protein JCGZ_03337 [Jatropha curcas]
6 Hb_004875_040 0.237303171 - - PREDICTED: uncharacterized protein LOC105645797 [Jatropha curcas]
7 Hb_161981_010 0.2388934101 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
8 Hb_000521_350 0.2399297152 - - unnamed protein product [Vitis vinifera]
9 Hb_148817_010 0.2400883934 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
10 Hb_086122_030 0.2464505358 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
11 Hb_000032_330 0.2508138595 - - conserved hypothetical protein [Ricinus communis]
12 Hb_128582_010 0.2566155913 - - -
13 Hb_004162_020 0.2571163627 - - -
14 Hb_000059_110 0.2593722559 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
15 Hb_001821_030 0.2594129668 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
16 Hb_000081_030 0.2607972935 - - BnaC09g05810D [Brassica napus]
17 Hb_000761_030 0.2613746013 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
18 Hb_060272_010 0.262623641 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
19 Hb_041063_010 0.2636257499 - - Disease resistance protein RFL1, putative [Ricinus communis]
20 Hb_003469_030 0.2651337902 - - hypothetical protein JCGZ_01307 [Jatropha curcas]

Gene co-expression network

sample Hb_099448_010 Hb_099448_010 Hb_001660_010 Hb_001660_010 Hb_099448_010--Hb_001660_010 Hb_001348_220 Hb_001348_220 Hb_099448_010--Hb_001348_220 Hb_095532_010 Hb_095532_010 Hb_099448_010--Hb_095532_010 Hb_000565_010 Hb_000565_010 Hb_099448_010--Hb_000565_010 Hb_004875_040 Hb_004875_040 Hb_099448_010--Hb_004875_040 Hb_161981_010 Hb_161981_010 Hb_099448_010--Hb_161981_010 Hb_000181_450 Hb_000181_450 Hb_001660_010--Hb_000181_450 Hb_004724_070 Hb_004724_070 Hb_001660_010--Hb_004724_070 Hb_001934_010 Hb_001934_010 Hb_001660_010--Hb_001934_010 Hb_112011_010 Hb_112011_010 Hb_001660_010--Hb_112011_010 Hb_017866_010 Hb_017866_010 Hb_001660_010--Hb_017866_010 Hb_148817_010 Hb_148817_010 Hb_001348_220--Hb_148817_010 Hb_001348_220--Hb_004875_040 Hb_000099_020 Hb_000099_020 Hb_001348_220--Hb_000099_020 Hb_014115_010 Hb_014115_010 Hb_001348_220--Hb_014115_010 Hb_000761_030 Hb_000761_030 Hb_001348_220--Hb_000761_030 Hb_000521_350 Hb_000521_350 Hb_001348_220--Hb_000521_350 Hb_095532_010--Hb_148817_010 Hb_003469_030 Hb_003469_030 Hb_095532_010--Hb_003469_030 Hb_000032_330 Hb_000032_330 Hb_095532_010--Hb_000032_330 Hb_095532_010--Hb_161981_010 Hb_095532_010--Hb_000521_350 Hb_000670_080 Hb_000670_080 Hb_095532_010--Hb_000670_080 Hb_020581_030 Hb_020581_030 Hb_000565_010--Hb_020581_030 Hb_004041_080 Hb_004041_080 Hb_000565_010--Hb_004041_080 Hb_085327_010 Hb_085327_010 Hb_000565_010--Hb_085327_010 Hb_005392_100 Hb_005392_100 Hb_000565_010--Hb_005392_100 Hb_007163_140 Hb_007163_140 Hb_000565_010--Hb_007163_140 Hb_020805_110 Hb_020805_110 Hb_004875_040--Hb_020805_110 Hb_004875_040--Hb_148817_010 Hb_001856_150 Hb_001856_150 Hb_004875_040--Hb_001856_150 Hb_000098_210 Hb_000098_210 Hb_004875_040--Hb_000098_210 Hb_000676_380 Hb_000676_380 Hb_004875_040--Hb_000676_380 Hb_006314_020 Hb_006314_020 Hb_004875_040--Hb_006314_020 Hb_086122_030 Hb_086122_030 Hb_161981_010--Hb_086122_030 Hb_060272_010 Hb_060272_010 Hb_161981_010--Hb_060272_010 Hb_161981_010--Hb_000521_350 Hb_000155_270 Hb_000155_270 Hb_161981_010--Hb_000155_270 Hb_006268_010 Hb_006268_010 Hb_161981_010--Hb_006268_010 Hb_161981_010--Hb_148817_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0455327 0 0.180205 0 0.0396343
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.133267 0

CAGE analysis