Hb_020581_030

Information

Type -
Description -
Location Contig20581: 57193-69553
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID S8BZR2
description Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_17111 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21216: 51942-95174
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020581_030 0.0 - - -
2 Hb_007163_140 0.1346619487 transcription factor TF Family: bHLH hypothetical protein JCGZ_12606 [Jatropha curcas]
3 Hb_004041_080 0.1679341569 - - PREDICTED: uncharacterized protein LOC105639186 [Jatropha curcas]
4 Hb_000565_010 0.1952421985 - - hypothetical protein JCGZ_03337 [Jatropha curcas]
5 Hb_085327_010 0.2155947198 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
6 Hb_001454_340 0.2266731828 - - ATDI21 [Manihot esculenta]
7 Hb_001687_050 0.2402604458 - - -
8 Hb_033006_040 0.241094398 - - sulfate transporter, putative [Ricinus communis]
9 Hb_000862_020 0.2451477342 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
10 Hb_101089_010 0.2492669454 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
11 Hb_011861_110 0.250453934 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
12 Hb_000792_060 0.2556725431 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000088_160 0.2607470055 - - PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
14 Hb_005380_040 0.2708935582 - - hypothetical protein PRUPE_ppa015877mg, partial [Prunus persica]
15 Hb_010810_090 0.2766926943 - - -
16 Hb_007194_020 0.2849241285 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
17 Hb_133636_010 0.2849945712 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
18 Hb_050484_010 0.2860179459 - - unnamed protein product [Vitis vinifera]
19 Hb_005663_050 0.2860322084 - - amino acid transporter, putative [Ricinus communis]
20 Hb_129279_020 0.288698219 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]

Gene co-expression network

sample Hb_020581_030 Hb_020581_030 Hb_007163_140 Hb_007163_140 Hb_020581_030--Hb_007163_140 Hb_004041_080 Hb_004041_080 Hb_020581_030--Hb_004041_080 Hb_000565_010 Hb_000565_010 Hb_020581_030--Hb_000565_010 Hb_085327_010 Hb_085327_010 Hb_020581_030--Hb_085327_010 Hb_001454_340 Hb_001454_340 Hb_020581_030--Hb_001454_340 Hb_001687_050 Hb_001687_050 Hb_020581_030--Hb_001687_050 Hb_007163_140--Hb_004041_080 Hb_005380_040 Hb_005380_040 Hb_007163_140--Hb_005380_040 Hb_011861_110 Hb_011861_110 Hb_007163_140--Hb_011861_110 Hb_101089_010 Hb_101089_010 Hb_007163_140--Hb_101089_010 Hb_003175_020 Hb_003175_020 Hb_007163_140--Hb_003175_020 Hb_004041_080--Hb_085327_010 Hb_005663_050 Hb_005663_050 Hb_004041_080--Hb_005663_050 Hb_000334_250 Hb_000334_250 Hb_004041_080--Hb_000334_250 Hb_004041_080--Hb_001454_340 Hb_009515_010 Hb_009515_010 Hb_004041_080--Hb_009515_010 Hb_000565_010--Hb_004041_080 Hb_099448_010 Hb_099448_010 Hb_000565_010--Hb_099448_010 Hb_000565_010--Hb_085327_010 Hb_005392_100 Hb_005392_100 Hb_000565_010--Hb_005392_100 Hb_000565_010--Hb_007163_140 Hb_085327_010--Hb_005663_050 Hb_085327_010--Hb_000334_250 Hb_085327_010--Hb_001454_340 Hb_085327_010--Hb_009515_010 Hb_033006_040 Hb_033006_040 Hb_085327_010--Hb_033006_040 Hb_001454_340--Hb_033006_040 Hb_006711_010 Hb_006711_010 Hb_001454_340--Hb_006711_010 Hb_000380_040 Hb_000380_040 Hb_001454_340--Hb_000380_040 Hb_050484_010 Hb_050484_010 Hb_001454_340--Hb_050484_010 Hb_003119_070 Hb_003119_070 Hb_001454_340--Hb_003119_070 Hb_002007_230 Hb_002007_230 Hb_001454_340--Hb_002007_230 Hb_021901_010 Hb_021901_010 Hb_001687_050--Hb_021901_010 Hb_002774_130 Hb_002774_130 Hb_001687_050--Hb_002774_130 Hb_000862_020 Hb_000862_020 Hb_001687_050--Hb_000862_020 Hb_001073_020 Hb_001073_020 Hb_001687_050--Hb_001073_020 Hb_004041_090 Hb_004041_090 Hb_001687_050--Hb_004041_090 Hb_001687_050--Hb_033006_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.357572 0 0.104867 0 0.197404
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.521604 0

CAGE analysis