Hb_021901_010

Information

Type -
Description -
Location Contig21901: 25-2560
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021901_010 0.0 - - -
2 Hb_001073_020 0.0875213795 - - hypothetical protein CISIN_1g031854mg [Citrus sinensis]
3 Hb_032582_010 0.1085503733 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
4 Hb_013654_010 0.109122796 - - unnamed protein product [Vitis vinifera]
5 Hb_002986_110 0.1097852056 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
6 Hb_002005_010 0.1110874524 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
7 Hb_008214_010 0.1116739581 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
8 Hb_008052_020 0.1117483139 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
9 Hb_032920_080 0.1122569189 - - PREDICTED: uncharacterized protein LOC104602705 [Nelumbo nucifera]
10 Hb_001814_090 0.1126529594 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
11 Hb_060245_010 0.112734445 - - -
12 Hb_001476_010 0.1130004525 - - hypothetical protein JCGZ_15669 [Jatropha curcas]
13 Hb_012120_010 0.1131028254 - - -
14 Hb_140406_010 0.1131503851 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
15 Hb_051719_020 0.1133443153 - - PREDICTED: toll/interleukin-1 receptor-like protein [Jatropha curcas]
16 Hb_027556_030 0.1135608831 - - PREDICTED: pleiotropic drug resistance protein 1-like, partial [Gossypium raimondii]
17 Hb_001611_030 0.1136842224 - - -
18 Hb_002400_120 0.1137541461 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
19 Hb_003894_130 0.1139029023 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
20 Hb_013405_120 0.1139999295 - - -

Gene co-expression network

sample Hb_021901_010 Hb_021901_010 Hb_001073_020 Hb_001073_020 Hb_021901_010--Hb_001073_020 Hb_032582_010 Hb_032582_010 Hb_021901_010--Hb_032582_010 Hb_013654_010 Hb_013654_010 Hb_021901_010--Hb_013654_010 Hb_002986_110 Hb_002986_110 Hb_021901_010--Hb_002986_110 Hb_002005_010 Hb_002005_010 Hb_021901_010--Hb_002005_010 Hb_008214_010 Hb_008214_010 Hb_021901_010--Hb_008214_010 Hb_001168_080 Hb_001168_080 Hb_001073_020--Hb_001168_080 Hb_001073_020--Hb_032582_010 Hb_000905_030 Hb_000905_030 Hb_001073_020--Hb_000905_030 Hb_010839_020 Hb_010839_020 Hb_001073_020--Hb_010839_020 Hb_002138_030 Hb_002138_030 Hb_001073_020--Hb_002138_030 Hb_002677_010 Hb_002677_010 Hb_032582_010--Hb_002677_010 Hb_008616_020 Hb_008616_020 Hb_032582_010--Hb_008616_020 Hb_032582_010--Hb_002986_110 Hb_032582_010--Hb_013654_010 Hb_032582_010--Hb_000905_030 Hb_000185_060 Hb_000185_060 Hb_032582_010--Hb_000185_060 Hb_013654_010--Hb_002986_110 Hb_013654_010--Hb_008214_010 Hb_008052_020 Hb_008052_020 Hb_013654_010--Hb_008052_020 Hb_013654_010--Hb_002005_010 Hb_032215_070 Hb_032215_070 Hb_013654_010--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_013654_010--Hb_001427_130 Hb_002986_110--Hb_002005_010 Hb_002986_110--Hb_008214_010 Hb_002986_110--Hb_008052_020 Hb_032443_030 Hb_032443_030 Hb_002986_110--Hb_032443_030 Hb_002986_110--Hb_032215_070 Hb_002005_010--Hb_008214_010 Hb_002005_010--Hb_008052_020 Hb_002005_010--Hb_032215_070 Hb_002005_010--Hb_001427_130 Hb_032920_080 Hb_032920_080 Hb_002005_010--Hb_032920_080 Hb_008214_010--Hb_008052_020 Hb_008214_010--Hb_032215_070 Hb_008214_010--Hb_001427_130 Hb_003010_060 Hb_003010_060 Hb_008214_010--Hb_003010_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.141813 17.0733 0.0177216 0.041351 0.0237165 0.625097
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 17.1603 0

CAGE analysis