Hb_032582_010

Information

Type -
Description -
Location Contig32582: 48451-50258
Sequence    

Annotation

kegg
ID rcu:RCOM_1417700
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012085047.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID Q9SZ46
description Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1
trembl
ID A0A067JQW3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17504 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34295: 48468-50262
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032582_010 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_002677_010 0.0482022951 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2 [Populus euphratica]
3 Hb_008616_020 0.0696514249 - - unnamed protein product [Vitis vinifera]
4 Hb_002986_110 0.0729432369 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
5 Hb_013654_010 0.0732509908 - - unnamed protein product [Vitis vinifera]
6 Hb_000905_030 0.0763633904 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
7 Hb_000185_060 0.0768443091 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
8 Hb_008053_070 0.0799165036 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
9 Hb_001427_130 0.0839786532 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
10 Hb_032215_070 0.0839929832 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_003010_060 0.0845145445 - - Patatin T5 precursor, putative [Ricinus communis]
12 Hb_008052_020 0.0857767004 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
13 Hb_008214_010 0.085883031 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
14 Hb_002005_010 0.0870268404 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
15 Hb_001168_080 0.0877356065 - - kinase, putative [Ricinus communis]
16 Hb_181092_010 0.0879778823 - - unnamed protein product [Vitis vinifera]
17 Hb_010839_020 0.0910123337 - - -
18 Hb_001073_020 0.0914015013 - - hypothetical protein CISIN_1g031854mg [Citrus sinensis]
19 Hb_002138_030 0.0919372727 - - -
20 Hb_151236_010 0.0934549127 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]

Gene co-expression network

sample Hb_032582_010 Hb_032582_010 Hb_002677_010 Hb_002677_010 Hb_032582_010--Hb_002677_010 Hb_008616_020 Hb_008616_020 Hb_032582_010--Hb_008616_020 Hb_002986_110 Hb_002986_110 Hb_032582_010--Hb_002986_110 Hb_013654_010 Hb_013654_010 Hb_032582_010--Hb_013654_010 Hb_000905_030 Hb_000905_030 Hb_032582_010--Hb_000905_030 Hb_000185_060 Hb_000185_060 Hb_032582_010--Hb_000185_060 Hb_002677_010--Hb_008616_020 Hb_002677_010--Hb_000185_060 Hb_181092_010 Hb_181092_010 Hb_002677_010--Hb_181092_010 Hb_002677_010--Hb_002986_110 Hb_008053_070 Hb_008053_070 Hb_002677_010--Hb_008053_070 Hb_008616_020--Hb_000185_060 Hb_001376_040 Hb_001376_040 Hb_008616_020--Hb_001376_040 Hb_008616_020--Hb_008053_070 Hb_008616_020--Hb_000905_030 Hb_002986_110--Hb_013654_010 Hb_002005_010 Hb_002005_010 Hb_002986_110--Hb_002005_010 Hb_008214_010 Hb_008214_010 Hb_002986_110--Hb_008214_010 Hb_008052_020 Hb_008052_020 Hb_002986_110--Hb_008052_020 Hb_032443_030 Hb_032443_030 Hb_002986_110--Hb_032443_030 Hb_032215_070 Hb_032215_070 Hb_002986_110--Hb_032215_070 Hb_013654_010--Hb_008214_010 Hb_013654_010--Hb_008052_020 Hb_013654_010--Hb_002005_010 Hb_013654_010--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_013654_010--Hb_001427_130 Hb_000905_030--Hb_008052_020 Hb_000905_030--Hb_008214_010 Hb_000905_030--Hb_002005_010 Hb_000905_030--Hb_032215_070 Hb_000905_030--Hb_001427_130 Hb_003010_060 Hb_003010_060 Hb_000905_030--Hb_003010_060 Hb_000185_060--Hb_008053_070 Hb_000185_060--Hb_181092_010 Hb_000185_060--Hb_001376_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.44188 289.844 1.90762 3.30404 0.0116783 0.23262
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.159157 0.0208703 0.433496 342.172 0.482923

CAGE analysis