Hb_001427_130

Information

Type -
Description -
Location Contig1427: 133736-134484
Sequence    

Annotation

kegg
ID cam:101510272
description uncharacterized LOC101510272
nr
ID XP_004499524.1
description PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
swissprot
ID -
description -
trembl
ID A0A0A9IZD4
description Uncharacterized protein OS=Arundo donax PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001427_130 0.0 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
2 Hb_032215_070 0.0028153856 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_003010_060 0.0086088327 - - Patatin T5 precursor, putative [Ricinus communis]
4 Hb_008052_020 0.0185371505 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
5 Hb_008214_010 0.01905299 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
6 Hb_002005_010 0.0239100264 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
7 Hb_010839_020 0.034244168 - - -
8 Hb_002138_030 0.0365856179 - - -
9 Hb_013654_010 0.0368777246 - - unnamed protein product [Vitis vinifera]
10 Hb_151236_010 0.040184968 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
11 Hb_000905_030 0.0477163248 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
12 Hb_004195_050 0.0486419107 - - -
13 Hb_007382_060 0.0486818482 - - -
14 Hb_002986_110 0.0499131288 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
15 Hb_000000_220 0.0522621494 - - protein with unknown function [Ricinus communis]
16 Hb_007658_020 0.0525900805 - - Beta-amyrin synthase [Glycine soja]
17 Hb_032920_080 0.0548175567 - - PREDICTED: uncharacterized protein LOC104602705 [Nelumbo nucifera]
18 Hb_001814_090 0.0569811599 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
19 Hb_060245_010 0.0574011691 - - -
20 Hb_001476_010 0.0587222999 - - hypothetical protein JCGZ_15669 [Jatropha curcas]

Gene co-expression network

sample Hb_001427_130 Hb_001427_130 Hb_032215_070 Hb_032215_070 Hb_001427_130--Hb_032215_070 Hb_003010_060 Hb_003010_060 Hb_001427_130--Hb_003010_060 Hb_008052_020 Hb_008052_020 Hb_001427_130--Hb_008052_020 Hb_008214_010 Hb_008214_010 Hb_001427_130--Hb_008214_010 Hb_002005_010 Hb_002005_010 Hb_001427_130--Hb_002005_010 Hb_010839_020 Hb_010839_020 Hb_001427_130--Hb_010839_020 Hb_032215_070--Hb_003010_060 Hb_032215_070--Hb_008052_020 Hb_032215_070--Hb_008214_010 Hb_032215_070--Hb_002005_010 Hb_013654_010 Hb_013654_010 Hb_032215_070--Hb_013654_010 Hb_003010_060--Hb_010839_020 Hb_003010_060--Hb_008052_020 Hb_003010_060--Hb_008214_010 Hb_002138_030 Hb_002138_030 Hb_003010_060--Hb_002138_030 Hb_008052_020--Hb_008214_010 Hb_008052_020--Hb_002005_010 Hb_008052_020--Hb_013654_010 Hb_008214_010--Hb_002005_010 Hb_008214_010--Hb_013654_010 Hb_032920_080 Hb_032920_080 Hb_002005_010--Hb_032920_080 Hb_002005_010--Hb_013654_010 Hb_010839_020--Hb_002138_030 Hb_151236_010 Hb_151236_010 Hb_010839_020--Hb_151236_010 Hb_004195_050 Hb_004195_050 Hb_010839_020--Hb_004195_050 Hb_007382_060 Hb_007382_060 Hb_010839_020--Hb_007382_060 Hb_000000_220 Hb_000000_220 Hb_010839_020--Hb_000000_220 Hb_007658_020 Hb_007658_020 Hb_010839_020--Hb_007658_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.140062 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.166114 0

CAGE analysis