Hb_000905_030

Information

Type -
Description -
Location Contig905: 13449-24846
Sequence    

Annotation

kegg
ID rcu:RCOM_1525810
description cytochrome P450, putative (EC:1.14.13.77)
nr
ID XP_012065519.1
description PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
swissprot
ID I7C6E8
description Beta-amyrin 28-oxidase OS=Panax ginseng PE=2 SV=1
trembl
ID A0A067L4P5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16728 PE=3 SV=1
Gene Ontology
ID GO:0005506
description beta-amyrin 28-oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000905_030 0.0 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
2 Hb_008052_020 0.0449666053 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
3 Hb_008214_010 0.0449968087 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
4 Hb_002005_010 0.0455669783 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
5 Hb_032215_070 0.0468398658 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_001427_130 0.0477163248 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
7 Hb_003010_060 0.0512676229 - - Patatin T5 precursor, putative [Ricinus communis]
8 Hb_013654_010 0.0547184492 - - unnamed protein product [Vitis vinifera]
9 Hb_001168_080 0.0576469011 - - kinase, putative [Ricinus communis]
10 Hb_032920_080 0.0592360699 - - PREDICTED: uncharacterized protein LOC104602705 [Nelumbo nucifera]
11 Hb_001814_090 0.0606686597 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
12 Hb_060245_010 0.060951756 - - -
13 Hb_001476_010 0.0618523697 - - hypothetical protein JCGZ_15669 [Jatropha curcas]
14 Hb_002986_110 0.0620942389 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
15 Hb_012120_010 0.0621901728 - - -
16 Hb_140406_010 0.0623455682 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
17 Hb_051719_020 0.0629696897 - - PREDICTED: toll/interleukin-1 receptor-like protein [Jatropha curcas]
18 Hb_027556_030 0.0636498989 - - PREDICTED: pleiotropic drug resistance protein 1-like, partial [Gossypium raimondii]
19 Hb_001611_030 0.0640300193 - - -
20 Hb_002400_120 0.0642433134 - - hypothetical protein B456_002G103400 [Gossypium raimondii]

Gene co-expression network

sample Hb_000905_030 Hb_000905_030 Hb_008052_020 Hb_008052_020 Hb_000905_030--Hb_008052_020 Hb_008214_010 Hb_008214_010 Hb_000905_030--Hb_008214_010 Hb_002005_010 Hb_002005_010 Hb_000905_030--Hb_002005_010 Hb_032215_070 Hb_032215_070 Hb_000905_030--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_000905_030--Hb_001427_130 Hb_003010_060 Hb_003010_060 Hb_000905_030--Hb_003010_060 Hb_008052_020--Hb_008214_010 Hb_008052_020--Hb_002005_010 Hb_008052_020--Hb_032215_070 Hb_008052_020--Hb_001427_130 Hb_008052_020--Hb_003010_060 Hb_013654_010 Hb_013654_010 Hb_008052_020--Hb_013654_010 Hb_008214_010--Hb_002005_010 Hb_008214_010--Hb_032215_070 Hb_008214_010--Hb_001427_130 Hb_008214_010--Hb_003010_060 Hb_008214_010--Hb_013654_010 Hb_002005_010--Hb_032215_070 Hb_002005_010--Hb_001427_130 Hb_032920_080 Hb_032920_080 Hb_002005_010--Hb_032920_080 Hb_002005_010--Hb_013654_010 Hb_032215_070--Hb_001427_130 Hb_032215_070--Hb_003010_060 Hb_032215_070--Hb_013654_010 Hb_001427_130--Hb_003010_060 Hb_010839_020 Hb_010839_020 Hb_001427_130--Hb_010839_020 Hb_003010_060--Hb_010839_020 Hb_002138_030 Hb_002138_030 Hb_003010_060--Hb_002138_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.13764 0.00965415 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.25017 0

CAGE analysis