Hb_001168_080

Information

Type -
Description -
Location Contig1168: 71201-73168
Sequence    

Annotation

kegg
ID rcu:RCOM_0231520
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002527233.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SML4
description Kinase, putative OS=Ricinus communis GN=RCOM_0231520 PE=3 SV=1
Gene Ontology
ID GO:0005622
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001168_080 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000905_030 0.0576469011 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
3 Hb_151236_010 0.0582727098 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
4 Hb_002138_030 0.0583344269 - - -
5 Hb_010839_020 0.058493268 - - -
6 Hb_004195_050 0.0589961743 - - -
7 Hb_007382_060 0.0590024406 - - -
8 Hb_000000_220 0.0596700866 - - protein with unknown function [Ricinus communis]
9 Hb_007658_020 0.0597415796 - - Beta-amyrin synthase [Glycine soja]
10 Hb_003010_060 0.0658740587 - - Patatin T5 precursor, putative [Ricinus communis]
11 Hb_083377_010 0.0692022102 - - unnamed protein product [Vitis vinifera]
12 Hb_001719_030 0.0695567797 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_008397_020 0.0699468216 - - polyprotein [Oryza australiensis]
14 Hb_003735_010 0.0700232641 - - -
15 Hb_001427_130 0.0702932895 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
16 Hb_004918_040 0.0712230347 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005846_010 0.0713228038 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
18 Hb_032215_070 0.0719022212 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_132270_010 0.0755593389 - - hypothetical protein JCGZ_25438 [Jatropha curcas]
20 Hb_005656_090 0.080216825 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]

Gene co-expression network

sample Hb_001168_080 Hb_001168_080 Hb_000905_030 Hb_000905_030 Hb_001168_080--Hb_000905_030 Hb_151236_010 Hb_151236_010 Hb_001168_080--Hb_151236_010 Hb_002138_030 Hb_002138_030 Hb_001168_080--Hb_002138_030 Hb_010839_020 Hb_010839_020 Hb_001168_080--Hb_010839_020 Hb_004195_050 Hb_004195_050 Hb_001168_080--Hb_004195_050 Hb_007382_060 Hb_007382_060 Hb_001168_080--Hb_007382_060 Hb_008052_020 Hb_008052_020 Hb_000905_030--Hb_008052_020 Hb_008214_010 Hb_008214_010 Hb_000905_030--Hb_008214_010 Hb_002005_010 Hb_002005_010 Hb_000905_030--Hb_002005_010 Hb_032215_070 Hb_032215_070 Hb_000905_030--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_000905_030--Hb_001427_130 Hb_003010_060 Hb_003010_060 Hb_000905_030--Hb_003010_060 Hb_151236_010--Hb_002138_030 Hb_151236_010--Hb_010839_020 Hb_151236_010--Hb_004195_050 Hb_151236_010--Hb_007382_060 Hb_000000_220 Hb_000000_220 Hb_151236_010--Hb_000000_220 Hb_007658_020 Hb_007658_020 Hb_151236_010--Hb_007658_020 Hb_002138_030--Hb_010839_020 Hb_002138_030--Hb_004195_050 Hb_002138_030--Hb_007382_060 Hb_002138_030--Hb_000000_220 Hb_002138_030--Hb_007658_020 Hb_010839_020--Hb_004195_050 Hb_010839_020--Hb_007382_060 Hb_010839_020--Hb_000000_220 Hb_010839_020--Hb_007658_020 Hb_004195_050--Hb_007382_060 Hb_004195_050--Hb_000000_220 Hb_004195_050--Hb_007658_020 Hb_007382_060--Hb_000000_220 Hb_007382_060--Hb_007658_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.452671 0.00750225 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.647408 0

CAGE analysis