Hb_001687_050

Information

Type -
Description -
Location Contig1687: 94917-97878
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001687_050 0.0 - - -
2 Hb_021901_010 0.1667368318 - - -
3 Hb_002774_130 0.1855023415 - - -
4 Hb_000862_020 0.1866226819 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
5 Hb_001073_020 0.198180338 - - hypothetical protein CISIN_1g031854mg [Citrus sinensis]
6 Hb_004041_090 0.2038878915 - - conserved hypothetical protein [Ricinus communis]
7 Hb_033006_040 0.2146315314 - - sulfate transporter, putative [Ricinus communis]
8 Hb_046117_040 0.2179780653 - - hypothetical protein JCGZ_07941 [Jatropha curcas]
9 Hb_001454_340 0.2217846728 - - ATDI21 [Manihot esculenta]
10 Hb_001427_130 0.2265654481 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
11 Hb_032215_070 0.226576865 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_003010_060 0.2267362246 - - Patatin T5 precursor, putative [Ricinus communis]
13 Hb_008052_020 0.2272492492 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
14 Hb_008214_010 0.2272887432 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
15 Hb_002005_010 0.2277145942 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
16 Hb_010839_020 0.2290680848 - - -
17 Hb_013654_010 0.2293123997 - - unnamed protein product [Vitis vinifera]
18 Hb_002138_030 0.2294153294 - - -
19 Hb_151236_010 0.2299922069 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
20 Hb_000905_030 0.2311585322 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]

Gene co-expression network

sample Hb_001687_050 Hb_001687_050 Hb_021901_010 Hb_021901_010 Hb_001687_050--Hb_021901_010 Hb_002774_130 Hb_002774_130 Hb_001687_050--Hb_002774_130 Hb_000862_020 Hb_000862_020 Hb_001687_050--Hb_000862_020 Hb_001073_020 Hb_001073_020 Hb_001687_050--Hb_001073_020 Hb_004041_090 Hb_004041_090 Hb_001687_050--Hb_004041_090 Hb_033006_040 Hb_033006_040 Hb_001687_050--Hb_033006_040 Hb_021901_010--Hb_001073_020 Hb_032582_010 Hb_032582_010 Hb_021901_010--Hb_032582_010 Hb_013654_010 Hb_013654_010 Hb_021901_010--Hb_013654_010 Hb_002986_110 Hb_002986_110 Hb_021901_010--Hb_002986_110 Hb_002005_010 Hb_002005_010 Hb_021901_010--Hb_002005_010 Hb_008214_010 Hb_008214_010 Hb_021901_010--Hb_008214_010 Hb_000281_170 Hb_000281_170 Hb_002774_130--Hb_000281_170 Hb_046117_040 Hb_046117_040 Hb_002774_130--Hb_046117_040 Hb_000117_170 Hb_000117_170 Hb_002774_130--Hb_000117_170 Hb_000849_110 Hb_000849_110 Hb_002774_130--Hb_000849_110 Hb_126907_010 Hb_126907_010 Hb_002774_130--Hb_126907_010 Hb_084611_010 Hb_084611_010 Hb_002774_130--Hb_084611_010 Hb_007194_020 Hb_007194_020 Hb_000862_020--Hb_007194_020 Hb_150998_010 Hb_150998_010 Hb_000862_020--Hb_150998_010 Hb_006216_010 Hb_006216_010 Hb_000862_020--Hb_006216_010 Hb_058148_010 Hb_058148_010 Hb_000862_020--Hb_058148_010 Hb_000862_020--Hb_046117_040 Hb_010810_090 Hb_010810_090 Hb_000862_020--Hb_010810_090 Hb_001168_080 Hb_001168_080 Hb_001073_020--Hb_001168_080 Hb_001073_020--Hb_032582_010 Hb_000905_030 Hb_000905_030 Hb_001073_020--Hb_000905_030 Hb_010839_020 Hb_010839_020 Hb_001073_020--Hb_010839_020 Hb_002138_030 Hb_002138_030 Hb_001073_020--Hb_002138_030 Hb_000541_020 Hb_000541_020 Hb_004041_090--Hb_000541_020 Hb_003085_050 Hb_003085_050 Hb_004041_090--Hb_003085_050 Hb_002766_040 Hb_002766_040 Hb_004041_090--Hb_002766_040 Hb_157122_010 Hb_157122_010 Hb_004041_090--Hb_157122_010 Hb_002553_080 Hb_002553_080 Hb_004041_090--Hb_002553_080 Hb_003010_040 Hb_003010_040 Hb_004041_090--Hb_003010_040 Hb_000380_040 Hb_000380_040 Hb_033006_040--Hb_000380_040 Hb_001454_340 Hb_001454_340 Hb_033006_040--Hb_001454_340 Hb_009083_080 Hb_009083_080 Hb_033006_040--Hb_009083_080 Hb_001157_150 Hb_001157_150 Hb_033006_040--Hb_001157_150 Hb_000185_060 Hb_000185_060 Hb_033006_040--Hb_000185_060 Hb_000300_570 Hb_000300_570 Hb_033006_040--Hb_000300_570
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0826176 0 0 0 0.0198101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0977819 0

CAGE analysis