Hb_010810_090

Information

Type -
Description -
Location Contig10810: 63131-63898
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016772
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010810_090 0.0 - - -
2 Hb_007194_020 0.1536443039 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
3 Hb_058148_010 0.1595833042 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
4 Hb_000862_020 0.184666404 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
5 Hb_063472_010 0.21475126 - - hypothetical protein [Pseudomonas tolaasii]
6 Hb_045527_010 0.2402186788 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
7 Hb_001410_100 0.2481934361 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
8 Hb_020581_030 0.2766926943 - - -
9 Hb_006216_010 0.281297071 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]
10 Hb_150998_010 0.2865962703 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
11 Hb_001687_050 0.2873207741 - - -
12 Hb_010521_010 0.2949940475 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]
13 Hb_000243_110 0.2964143828 - - PREDICTED: WAT1-related protein At3g53210-like [Jatropha curcas]
14 Hb_000541_020 0.3184866139 - - -
15 Hb_004246_010 0.3302232304 - - -
16 Hb_000608_070 0.3315755084 - - -
17 Hb_037960_010 0.332158486 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_165085_010 0.3366646537 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
19 Hb_142295_010 0.337369412 - - -
20 Hb_000483_110 0.3383973571 transcription factor TF Family: zf-HD Mini zinc finger 2 isoform 2, partial [Theobroma cacao]

Gene co-expression network

sample Hb_010810_090 Hb_010810_090 Hb_007194_020 Hb_007194_020 Hb_010810_090--Hb_007194_020 Hb_058148_010 Hb_058148_010 Hb_010810_090--Hb_058148_010 Hb_000862_020 Hb_000862_020 Hb_010810_090--Hb_000862_020 Hb_063472_010 Hb_063472_010 Hb_010810_090--Hb_063472_010 Hb_045527_010 Hb_045527_010 Hb_010810_090--Hb_045527_010 Hb_001410_100 Hb_001410_100 Hb_010810_090--Hb_001410_100 Hb_007194_020--Hb_058148_010 Hb_007194_020--Hb_000862_020 Hb_007194_020--Hb_063472_010 Hb_006216_010 Hb_006216_010 Hb_007194_020--Hb_006216_010 Hb_150998_010 Hb_150998_010 Hb_007194_020--Hb_150998_010 Hb_058148_010--Hb_063472_010 Hb_058148_010--Hb_045527_010 Hb_058148_010--Hb_000862_020 Hb_058148_010--Hb_006216_010 Hb_000862_020--Hb_150998_010 Hb_000862_020--Hb_006216_010 Hb_046117_040 Hb_046117_040 Hb_000862_020--Hb_046117_040 Hb_063472_010--Hb_045527_010 Hb_003185_060 Hb_003185_060 Hb_063472_010--Hb_003185_060 Hb_063472_010--Hb_006216_010 Hb_045527_010--Hb_003185_060 Hb_045527_010--Hb_007194_020 Hb_000580_040 Hb_000580_040 Hb_045527_010--Hb_000580_040 Hb_037960_010 Hb_037960_010 Hb_001410_100--Hb_037960_010 Hb_002595_020 Hb_002595_020 Hb_001410_100--Hb_002595_020 Hb_031862_280 Hb_031862_280 Hb_001410_100--Hb_031862_280 Hb_089610_010 Hb_089610_010 Hb_001410_100--Hb_089610_010 Hb_004894_010 Hb_004894_010 Hb_001410_100--Hb_004894_010 Hb_000243_110 Hb_000243_110 Hb_001410_100--Hb_000243_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0580725 0 0 0 0.102218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.128382 0

CAGE analysis