Hb_045527_010

Information

Type -
Description -
Location Contig45527: 178-965
Sequence    

Annotation

kegg
ID bvg:104886268
description uncharacterized LOC104886268
nr
ID XP_010521027.1
description PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
swissprot
ID -
description -
trembl
ID A0A072ULC5
description Uncharacterized protein OS=Medicago truncatula GN=MTR_6g065930 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045527_010 0.0 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
2 Hb_063472_010 0.0486151537 - - hypothetical protein [Pseudomonas tolaasii]
3 Hb_058148_010 0.1295386166 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
4 Hb_003185_060 0.1572145915 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Amborella trichopoda]
5 Hb_007194_020 0.1728586952 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
6 Hb_000580_040 0.2326476646 - - -
7 Hb_010810_090 0.2402186788 - - -
8 Hb_173423_010 0.2419163484 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006216_010 0.2498946185 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]
10 Hb_027337_070 0.2527237162 - - hypothetical protein POPTR_0001s29030g [Populus trichocarpa]
11 Hb_150998_010 0.2645973647 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
12 Hb_004361_030 0.2650765237 - - PREDICTED: uncharacterized protein LOC104239397 isoform X1 [Nicotiana sylvestris]
13 Hb_000862_020 0.2662890243 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
14 Hb_000407_060 0.3147707031 - - -
15 Hb_007545_160 0.3180998097 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
16 Hb_004410_060 0.3181109144 - - -
17 Hb_124976_010 0.3197066259 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_019859_030 0.3205351714 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
19 Hb_007139_010 0.3205717662 - - hypothetical protein POPTR_0016s134801g, partial [Populus trichocarpa]
20 Hb_012815_020 0.3206654785 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_045527_010 Hb_045527_010 Hb_063472_010 Hb_063472_010 Hb_045527_010--Hb_063472_010 Hb_058148_010 Hb_058148_010 Hb_045527_010--Hb_058148_010 Hb_003185_060 Hb_003185_060 Hb_045527_010--Hb_003185_060 Hb_007194_020 Hb_007194_020 Hb_045527_010--Hb_007194_020 Hb_000580_040 Hb_000580_040 Hb_045527_010--Hb_000580_040 Hb_010810_090 Hb_010810_090 Hb_045527_010--Hb_010810_090 Hb_063472_010--Hb_058148_010 Hb_063472_010--Hb_007194_020 Hb_063472_010--Hb_003185_060 Hb_006216_010 Hb_006216_010 Hb_063472_010--Hb_006216_010 Hb_063472_010--Hb_010810_090 Hb_058148_010--Hb_007194_020 Hb_000862_020 Hb_000862_020 Hb_058148_010--Hb_000862_020 Hb_058148_010--Hb_006216_010 Hb_058148_010--Hb_010810_090 Hb_004361_030 Hb_004361_030 Hb_003185_060--Hb_004361_030 Hb_027337_070 Hb_027337_070 Hb_003185_060--Hb_027337_070 Hb_003185_060--Hb_058148_010 Hb_003185_060--Hb_006216_010 Hb_007194_020--Hb_000862_020 Hb_007194_020--Hb_006216_010 Hb_150998_010 Hb_150998_010 Hb_007194_020--Hb_150998_010 Hb_007194_020--Hb_010810_090 Hb_173423_010 Hb_173423_010 Hb_000580_040--Hb_173423_010 Hb_043950_010 Hb_043950_010 Hb_000580_040--Hb_043950_010 Hb_007545_160 Hb_007545_160 Hb_000580_040--Hb_007545_160 Hb_004410_060 Hb_004410_060 Hb_000580_040--Hb_004410_060 Hb_124976_010 Hb_124976_010 Hb_000580_040--Hb_124976_010 Hb_019859_030 Hb_019859_030 Hb_000580_040--Hb_019859_030 Hb_010810_090--Hb_000862_020 Hb_001410_100 Hb_001410_100 Hb_010810_090--Hb_001410_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0741069 0 0 0 0.164278
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0551025 0

CAGE analysis