Hb_019859_030

Information

Type -
Description -
Location Contig19859: 18755-36539
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015642mg
description hypothetical protein
nr
ID EYU18275.1
description hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022PVK1
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018902mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019859_030 0.0 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
2 Hb_007139_010 0.0002885706 - - hypothetical protein POPTR_0016s134801g, partial [Populus trichocarpa]
3 Hb_012815_020 0.0010195339 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
4 Hb_124976_010 0.0070994794 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_000078_040 0.0150285339 - - PREDICTED: uncharacterized protein LOC104907366 [Beta vulgaris subsp. vulgaris]
6 Hb_004410_060 0.0273125883 - - -
7 Hb_022348_020 0.0344106017 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
8 Hb_003581_040 0.036518539 - - hypothetical protein PHAVU_002G080900g [Phaseolus vulgaris]
9 Hb_002871_200 0.0375865828 - - -
10 Hb_007545_160 0.0630954204 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
11 Hb_078466_020 0.0639214492 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
12 Hb_080147_010 0.0961666504 - - -
13 Hb_006183_010 0.0973053118 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_012733_080 0.0981048166 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_011362_030 0.1065188811 - - polyprotein [Oryza australiensis]
16 Hb_043950_010 0.1069322408 - - PREDICTED: uncharacterized protein LOC102619199, partial [Citrus sinensis]
17 Hb_002800_040 0.1455249894 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_004162_110 0.1459032492 - - hypothetical protein JCGZ_05404 [Jatropha curcas]
19 Hb_000243_100 0.1459329239 - - Purple acid phosphatase precursor, putative [Ricinus communis]
20 Hb_000580_040 0.158114774 - - -

Gene co-expression network

sample Hb_019859_030 Hb_019859_030 Hb_007139_010 Hb_007139_010 Hb_019859_030--Hb_007139_010 Hb_012815_020 Hb_012815_020 Hb_019859_030--Hb_012815_020 Hb_124976_010 Hb_124976_010 Hb_019859_030--Hb_124976_010 Hb_000078_040 Hb_000078_040 Hb_019859_030--Hb_000078_040 Hb_004410_060 Hb_004410_060 Hb_019859_030--Hb_004410_060 Hb_022348_020 Hb_022348_020 Hb_019859_030--Hb_022348_020 Hb_007139_010--Hb_012815_020 Hb_007139_010--Hb_124976_010 Hb_007139_010--Hb_000078_040 Hb_007139_010--Hb_004410_060 Hb_007139_010--Hb_022348_020 Hb_012815_020--Hb_124976_010 Hb_012815_020--Hb_000078_040 Hb_012815_020--Hb_004410_060 Hb_012815_020--Hb_022348_020 Hb_124976_010--Hb_004410_060 Hb_124976_010--Hb_000078_040 Hb_124976_010--Hb_022348_020 Hb_000078_040--Hb_022348_020 Hb_003581_040 Hb_003581_040 Hb_000078_040--Hb_003581_040 Hb_007545_160 Hb_007545_160 Hb_004410_060--Hb_007545_160 Hb_004410_060--Hb_000078_040 Hb_022348_020--Hb_003581_040 Hb_002871_200 Hb_002871_200 Hb_022348_020--Hb_002871_200 Hb_078466_020 Hb_078466_020 Hb_022348_020--Hb_078466_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00463014 0 0 0 0.00818613
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis