Hb_073146_010

Information

Type -
Description -
Location Contig73146: 1-1104
Sequence    

Annotation

kegg
ID pop:POPTR_0013s02830g
description hypothetical protein
nr
ID KDO64062.1
description hypothetical protein CISIN_1g022501mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067FKT2
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022501mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073146_010 0.0 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
2 Hb_001112_020 0.2703158048 - - PREDICTED: uncharacterized protein LOC103717724, partial [Phoenix dactylifera]
3 Hb_183209_010 0.273848759 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
4 Hb_006198_140 0.2978906984 - - hypothetical protein L484_015208 [Morus notabilis]
5 Hb_002774_090 0.3000479389 - - conserved hypothetical protein [Ricinus communis]
6 Hb_014175_010 0.3014496734 - - Uncharacterized protein TCM_033221 [Theobroma cacao]
7 Hb_001318_130 0.3043415249 - - PREDICTED: short-chain dehydrogenase reductase 3b-like [Populus euphratica]
8 Hb_002719_070 0.3170031409 - - gibberellin 20-oxidase, putative [Ricinus communis]
9 Hb_006829_010 0.3223872729 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_001103_040 0.3249974579 - - hypothetical protein POPTR_0013s11170g [Populus trichocarpa]
11 Hb_005679_100 0.3260906587 - - hypothetical protein POPTR_0013s15630g [Populus trichocarpa]
12 Hb_000935_070 0.3288393773 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
13 Hb_000189_490 0.3338621905 - - Sulfate/thiosulfate import ATP-binding protein cysA [Theobroma cacao]
14 Hb_001558_070 0.3360860953 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
15 Hb_044724_010 0.3370998271 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
16 Hb_006925_070 0.3390310599 - - hypothetical protein JCGZ_20652 [Jatropha curcas]
17 Hb_031004_010 0.3396778931 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
18 Hb_005779_040 0.3402872366 - - -
19 Hb_004837_170 0.3460202278 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
20 Hb_000649_310 0.3488206408 - - PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_073146_010 Hb_073146_010 Hb_001112_020 Hb_001112_020 Hb_073146_010--Hb_001112_020 Hb_183209_010 Hb_183209_010 Hb_073146_010--Hb_183209_010 Hb_006198_140 Hb_006198_140 Hb_073146_010--Hb_006198_140 Hb_002774_090 Hb_002774_090 Hb_073146_010--Hb_002774_090 Hb_014175_010 Hb_014175_010 Hb_073146_010--Hb_014175_010 Hb_001318_130 Hb_001318_130 Hb_073146_010--Hb_001318_130 Hb_001112_020--Hb_014175_010 Hb_006829_010 Hb_006829_010 Hb_001112_020--Hb_006829_010 Hb_010490_030 Hb_010490_030 Hb_001112_020--Hb_010490_030 Hb_114893_050 Hb_114893_050 Hb_001112_020--Hb_114893_050 Hb_002719_070 Hb_002719_070 Hb_001112_020--Hb_002719_070 Hb_000935_070 Hb_000935_070 Hb_183209_010--Hb_000935_070 Hb_183209_010--Hb_006198_140 Hb_000077_470 Hb_000077_470 Hb_183209_010--Hb_000077_470 Hb_006198_150 Hb_006198_150 Hb_183209_010--Hb_006198_150 Hb_001021_140 Hb_001021_140 Hb_183209_010--Hb_001021_140 Hb_002019_030 Hb_002019_030 Hb_183209_010--Hb_002019_030 Hb_006198_140--Hb_000935_070 Hb_001227_020 Hb_001227_020 Hb_006198_140--Hb_001227_020 Hb_001558_070 Hb_001558_070 Hb_006198_140--Hb_001558_070 Hb_006198_140--Hb_001021_140 Hb_001863_100 Hb_001863_100 Hb_006198_140--Hb_001863_100 Hb_003504_040 Hb_003504_040 Hb_002774_090--Hb_003504_040 Hb_044724_010 Hb_044724_010 Hb_002774_090--Hb_044724_010 Hb_005779_040 Hb_005779_040 Hb_002774_090--Hb_005779_040 Hb_002805_300 Hb_002805_300 Hb_002774_090--Hb_002805_300 Hb_002774_090--Hb_001318_130 Hb_067034_030 Hb_067034_030 Hb_002774_090--Hb_067034_030 Hb_014175_010--Hb_006829_010 Hb_010728_010 Hb_010728_010 Hb_014175_010--Hb_010728_010 Hb_075888_010 Hb_075888_010 Hb_014175_010--Hb_075888_010 Hb_000149_070 Hb_000149_070 Hb_014175_010--Hb_000149_070 Hb_006198_170 Hb_006198_170 Hb_001318_130--Hb_006198_170 Hb_012055_100 Hb_012055_100 Hb_001318_130--Hb_012055_100 Hb_001318_130--Hb_003504_040 Hb_001318_130--Hb_001863_100 Hb_001318_130--Hb_006198_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0474579 0.277616 0 0.179895 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.163208 0 0 0.206767 0

CAGE analysis