Hb_000149_070

Information

Type -
Description -
Location Contig149: 99889-105063
Sequence    

Annotation

kegg
ID rcu:RCOM_1494400
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.13)
nr
ID XP_012084738.1
description PREDICTED: uncharacterized protein At5g39570 isoform X1 [Jatropha curcas]
swissprot
ID Q9LK03
description Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3
trembl
ID A0A067JT85
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19875 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000149_070 0.0 - - PREDICTED: uncharacterized protein At5g39570 isoform X1 [Jatropha curcas]
2 Hb_000917_150 0.1723880442 - - conserved hypothetical protein [Ricinus communis]
3 Hb_006466_020 0.1744315736 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
4 Hb_010931_010 0.192867997 - - PREDICTED: protein YLS9-like [Jatropha curcas]
5 Hb_001329_040 0.2075479455 - - hypothetical protein RCOM_1345340 [Ricinus communis]
6 Hb_106204_010 0.2105531305 - - conserved hypothetical protein [Ricinus communis]
7 Hb_059162_010 0.2206015773 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_005218_070 0.221165478 transcription factor TF Family: MYB PREDICTED: transcription factor RAX3 isoform X2 [Populus euphratica]
9 Hb_047163_010 0.2252231526 - - PREDICTED: periaxin-like [Populus euphratica]
10 Hb_161393_010 0.2267202513 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000251_100 0.2267662922 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
12 Hb_041769_010 0.2290547511 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
13 Hb_001173_050 0.2291450103 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
14 Hb_002917_020 0.2313941677 - - predicted protein [Arabidopsis lyrata subsp. lyrata]
15 Hb_000951_030 0.233061575 - - kinase, putative [Ricinus communis]
16 Hb_000522_040 0.2332162259 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
17 Hb_002890_400 0.2332966023 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
18 Hb_183209_010 0.2333065981 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
19 Hb_002081_040 0.2337464491 - - PREDICTED: nucleobase-ascorbate transporter 4 [Jatropha curcas]
20 Hb_004185_040 0.2341270827 - - polygalacturonase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000149_070 Hb_000149_070 Hb_000917_150 Hb_000917_150 Hb_000149_070--Hb_000917_150 Hb_006466_020 Hb_006466_020 Hb_000149_070--Hb_006466_020 Hb_010931_010 Hb_010931_010 Hb_000149_070--Hb_010931_010 Hb_001329_040 Hb_001329_040 Hb_000149_070--Hb_001329_040 Hb_106204_010 Hb_106204_010 Hb_000149_070--Hb_106204_010 Hb_059162_010 Hb_059162_010 Hb_000149_070--Hb_059162_010 Hb_002917_020 Hb_002917_020 Hb_000917_150--Hb_002917_020 Hb_000917_150--Hb_059162_010 Hb_047163_010 Hb_047163_010 Hb_000917_150--Hb_047163_010 Hb_001951_090 Hb_001951_090 Hb_000917_150--Hb_001951_090 Hb_005218_070 Hb_005218_070 Hb_000917_150--Hb_005218_070 Hb_004931_060 Hb_004931_060 Hb_000917_150--Hb_004931_060 Hb_009771_070 Hb_009771_070 Hb_006466_020--Hb_009771_070 Hb_013652_010 Hb_013652_010 Hb_006466_020--Hb_013652_010 Hb_049677_010 Hb_049677_010 Hb_006466_020--Hb_049677_010 Hb_003602_070 Hb_003602_070 Hb_006466_020--Hb_003602_070 Hb_000402_220 Hb_000402_220 Hb_006466_020--Hb_000402_220 Hb_002890_400 Hb_002890_400 Hb_010931_010--Hb_002890_400 Hb_009012_020 Hb_009012_020 Hb_010931_010--Hb_009012_020 Hb_000522_040 Hb_000522_040 Hb_010931_010--Hb_000522_040 Hb_004463_040 Hb_004463_040 Hb_010931_010--Hb_004463_040 Hb_000684_020 Hb_000684_020 Hb_010931_010--Hb_000684_020 Hb_001902_180 Hb_001902_180 Hb_010931_010--Hb_001902_180 Hb_001678_030 Hb_001678_030 Hb_001329_040--Hb_001678_030 Hb_001638_110 Hb_001638_110 Hb_001329_040--Hb_001638_110 Hb_005228_170 Hb_005228_170 Hb_001329_040--Hb_005228_170 Hb_010326_030 Hb_010326_030 Hb_001329_040--Hb_010326_030 Hb_002671_110 Hb_002671_110 Hb_001329_040--Hb_002671_110 Hb_000616_050 Hb_000616_050 Hb_001329_040--Hb_000616_050 Hb_006153_200 Hb_006153_200 Hb_106204_010--Hb_006153_200 Hb_001195_440 Hb_001195_440 Hb_106204_010--Hb_001195_440 Hb_003462_150 Hb_003462_150 Hb_106204_010--Hb_003462_150 Hb_004544_080 Hb_004544_080 Hb_106204_010--Hb_004544_080 Hb_002999_090 Hb_002999_090 Hb_106204_010--Hb_002999_090 Hb_000141_230 Hb_000141_230 Hb_106204_010--Hb_000141_230 Hb_059162_010--Hb_047163_010 Hb_011628_030 Hb_011628_030 Hb_059162_010--Hb_011628_030 Hb_041769_010 Hb_041769_010 Hb_059162_010--Hb_041769_010 Hb_004185_040 Hb_004185_040 Hb_059162_010--Hb_004185_040 Hb_002743_030 Hb_002743_030 Hb_059162_010--Hb_002743_030 Hb_004195_040 Hb_004195_040 Hb_059162_010--Hb_004195_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.104483 0.00670607 0.0275922 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0410808 0 0 0.28913 0

CAGE analysis