Hb_000917_150

Information

Type -
Description -
Location Contig917: 171889-172194
Sequence    

Annotation

kegg
ID rcu:RCOM_0704470
description hypothetical protein
nr
ID XP_002524385.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8LAD7
description Protein IDA OS=Arabidopsis thaliana GN=IDA PE=2 SV=1
trembl
ID B9SEG6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0704470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000917_150 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002917_020 0.1192556016 - - predicted protein [Arabidopsis lyrata subsp. lyrata]
3 Hb_059162_010 0.1193354511 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_047163_010 0.1237786007 - - PREDICTED: periaxin-like [Populus euphratica]
5 Hb_001951_090 0.1251139559 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_005218_070 0.1357237887 transcription factor TF Family: MYB PREDICTED: transcription factor RAX3 isoform X2 [Populus euphratica]
7 Hb_004931_060 0.1370412358 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4 [Nelumbo nucifera]
8 Hb_011628_030 0.1383311865 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001952_110 0.1391503397 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
10 Hb_041769_010 0.1395360523 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
11 Hb_186298_010 0.1408954481 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_004109_300 0.1420459592 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
13 Hb_000251_100 0.1433488393 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_161393_010 0.1443477205 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_005653_020 0.1456357807 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
16 Hb_002234_150 0.1465200167 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
17 Hb_001173_050 0.1491389451 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
18 Hb_006446_060 0.1526275906 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
19 Hb_004185_040 0.1539987941 - - polygalacturonase, putative [Ricinus communis]
20 Hb_012019_020 0.1552259879 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000917_150 Hb_000917_150 Hb_002917_020 Hb_002917_020 Hb_000917_150--Hb_002917_020 Hb_059162_010 Hb_059162_010 Hb_000917_150--Hb_059162_010 Hb_047163_010 Hb_047163_010 Hb_000917_150--Hb_047163_010 Hb_001951_090 Hb_001951_090 Hb_000917_150--Hb_001951_090 Hb_005218_070 Hb_005218_070 Hb_000917_150--Hb_005218_070 Hb_004931_060 Hb_004931_060 Hb_000917_150--Hb_004931_060 Hb_002917_020--Hb_004931_060 Hb_186298_010 Hb_186298_010 Hb_002917_020--Hb_186298_010 Hb_005550_070 Hb_005550_070 Hb_002917_020--Hb_005550_070 Hb_011628_030 Hb_011628_030 Hb_002917_020--Hb_011628_030 Hb_002917_020--Hb_047163_010 Hb_002917_020--Hb_001951_090 Hb_059162_010--Hb_047163_010 Hb_059162_010--Hb_011628_030 Hb_041769_010 Hb_041769_010 Hb_059162_010--Hb_041769_010 Hb_004185_040 Hb_004185_040 Hb_059162_010--Hb_004185_040 Hb_002743_030 Hb_002743_030 Hb_059162_010--Hb_002743_030 Hb_004195_040 Hb_004195_040 Hb_059162_010--Hb_004195_040 Hb_047163_010--Hb_011628_030 Hb_125876_010 Hb_125876_010 Hb_047163_010--Hb_125876_010 Hb_047163_010--Hb_002743_030 Hb_004109_300 Hb_004109_300 Hb_047163_010--Hb_004109_300 Hb_047163_010--Hb_004931_060 Hb_001952_110 Hb_001952_110 Hb_001951_090--Hb_001952_110 Hb_008020_010 Hb_008020_010 Hb_001951_090--Hb_008020_010 Hb_002917_030 Hb_002917_030 Hb_001951_090--Hb_002917_030 Hb_012019_020 Hb_012019_020 Hb_001951_090--Hb_012019_020 Hb_002204_030 Hb_002204_030 Hb_005218_070--Hb_002204_030 Hb_005228_170 Hb_005228_170 Hb_005218_070--Hb_005228_170 Hb_000302_060 Hb_000302_060 Hb_005218_070--Hb_000302_060 Hb_002475_020 Hb_002475_020 Hb_005218_070--Hb_002475_020 Hb_009515_010 Hb_009515_010 Hb_005218_070--Hb_009515_010 Hb_002671_110 Hb_002671_110 Hb_005218_070--Hb_002671_110 Hb_004931_060--Hb_011628_030 Hb_004931_060--Hb_186298_010 Hb_004931_060--Hb_005550_070 Hb_004931_060--Hb_059162_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.3764 0.645622 1.55006 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.356251 0.280493 0 18.0398 0

CAGE analysis