Hb_125876_010

Information

Type -
Description -
Location Contig125876: 664-1902
Sequence    

Annotation

kegg
ID vvi:100261705
description (-)-alpha-terpineol synthase
nr
ID CBI40170.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q93X23
description Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1
trembl
ID D7UBQ6
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03770 PE=4 SV=1
Gene Ontology
ID GO:0009507
description terpene synthase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_125876_010 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_005846_010 0.0469670488 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
3 Hb_002743_030 0.0523107511 transcription factor TF Family: MYB PREDICTED: transcription factor RAX2 [Populus euphratica]
4 Hb_156949_010 0.0528701553 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
5 Hb_002603_020 0.0579877487 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
6 Hb_004109_300 0.0635263999 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
7 Hb_011628_030 0.0667203576 - - conserved hypothetical protein [Ricinus communis]
8 Hb_047163_010 0.0685402778 - - PREDICTED: periaxin-like [Populus euphratica]
9 Hb_005550_070 0.0757611801 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Populus euphratica]
10 Hb_005993_070 0.0912451655 - - lipid binding protein, putative [Ricinus communis]
11 Hb_181092_010 0.0921961304 - - unnamed protein product [Vitis vinifera]
12 Hb_000856_350 0.0990961672 transcription factor TF Family: WRKY WRKY transcription factor 36 [Jatropha curcas]
13 Hb_003074_070 0.1002512996 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
14 Hb_005731_080 0.100278537 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
15 Hb_000236_360 0.1008589697 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]
16 Hb_010139_010 0.1016333492 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
17 Hb_005656_090 0.1016577661 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]
18 Hb_002621_020 0.1017311827 - - -
19 Hb_000703_310 0.101949754 - - -
20 Hb_007441_030 0.102215593 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]

Gene co-expression network

sample Hb_125876_010 Hb_125876_010 Hb_005846_010 Hb_005846_010 Hb_125876_010--Hb_005846_010 Hb_002743_030 Hb_002743_030 Hb_125876_010--Hb_002743_030 Hb_156949_010 Hb_156949_010 Hb_125876_010--Hb_156949_010 Hb_002603_020 Hb_002603_020 Hb_125876_010--Hb_002603_020 Hb_004109_300 Hb_004109_300 Hb_125876_010--Hb_004109_300 Hb_011628_030 Hb_011628_030 Hb_125876_010--Hb_011628_030 Hb_005846_010--Hb_156949_010 Hb_005846_010--Hb_002603_020 Hb_005550_070 Hb_005550_070 Hb_005846_010--Hb_005550_070 Hb_001168_080 Hb_001168_080 Hb_005846_010--Hb_001168_080 Hb_005846_010--Hb_011628_030 Hb_003074_070 Hb_003074_070 Hb_002743_030--Hb_003074_070 Hb_002743_030--Hb_002603_020 Hb_047163_010 Hb_047163_010 Hb_002743_030--Hb_047163_010 Hb_005731_080 Hb_005731_080 Hb_002743_030--Hb_005731_080 Hb_002743_030--Hb_004109_300 Hb_156949_010--Hb_002603_020 Hb_181092_010 Hb_181092_010 Hb_156949_010--Hb_181092_010 Hb_004918_040 Hb_004918_040 Hb_156949_010--Hb_004918_040 Hb_003735_010 Hb_003735_010 Hb_156949_010--Hb_003735_010 Hb_000163_310 Hb_000163_310 Hb_002603_020--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_002603_020--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_002603_020--Hb_000703_310 Hb_002621_020 Hb_002621_020 Hb_002603_020--Hb_002621_020 Hb_004109_300--Hb_047163_010 Hb_000236_360 Hb_000236_360 Hb_004109_300--Hb_000236_360 Hb_004109_300--Hb_156949_010 Hb_004109_300--Hb_003074_070 Hb_011628_030--Hb_047163_010 Hb_059162_010 Hb_059162_010 Hb_011628_030--Hb_059162_010 Hb_004931_060 Hb_004931_060 Hb_011628_030--Hb_004931_060 Hb_011628_030--Hb_005550_070 Hb_011628_030--Hb_002743_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.50181 0.0282099 0.123544 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.75008 0

CAGE analysis