Hb_002603_020

Information

Type -
Description -
Location Contig2603: 6416-7301
Sequence    

Annotation

kegg
ID cic:CICLE_v10002149mg
description hypothetical protein
nr
ID XP_012091150.1
description PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCX9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03328 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase-like protein ccr3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002603_020 0.0 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
2 Hb_156949_010 0.0343944598 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
3 Hb_125876_010 0.0579877487 - - unnamed protein product [Vitis vinifera]
4 Hb_000163_310 0.0620808998 - - PREDICTED: ABC transporter C family member 4-like [Malus domestica]
5 Hb_007441_030 0.0621113392 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
6 Hb_000703_310 0.0623090979 - - -
7 Hb_002621_020 0.0627139639 - - -
8 Hb_006364_010 0.0630954627 - - -
9 Hb_005228_090 0.0632158534 - - PREDICTED: magnesium transporter MRS2-3-like [Citrus sinensis]
10 Hb_004693_030 0.0637885656 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
11 Hb_005846_010 0.0638423393 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
12 Hb_010139_010 0.0641065383 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
13 Hb_005656_090 0.0643607565 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]
14 Hb_072368_010 0.0644518374 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
15 Hb_002743_030 0.064790005 transcription factor TF Family: MYB PREDICTED: transcription factor RAX2 [Populus euphratica]
16 Hb_008159_030 0.0677039417 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
17 Hb_004918_040 0.0694913471 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003735_010 0.0704735042 - - -
19 Hb_008397_020 0.0705390597 - - polyprotein [Oryza australiensis]
20 Hb_001719_030 0.070879397 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]

Gene co-expression network

sample Hb_002603_020 Hb_002603_020 Hb_156949_010 Hb_156949_010 Hb_002603_020--Hb_156949_010 Hb_125876_010 Hb_125876_010 Hb_002603_020--Hb_125876_010 Hb_000163_310 Hb_000163_310 Hb_002603_020--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_002603_020--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_002603_020--Hb_000703_310 Hb_002621_020 Hb_002621_020 Hb_002603_020--Hb_002621_020 Hb_156949_010--Hb_125876_010 Hb_005846_010 Hb_005846_010 Hb_156949_010--Hb_005846_010 Hb_181092_010 Hb_181092_010 Hb_156949_010--Hb_181092_010 Hb_004918_040 Hb_004918_040 Hb_156949_010--Hb_004918_040 Hb_003735_010 Hb_003735_010 Hb_156949_010--Hb_003735_010 Hb_125876_010--Hb_005846_010 Hb_002743_030 Hb_002743_030 Hb_125876_010--Hb_002743_030 Hb_004109_300 Hb_004109_300 Hb_125876_010--Hb_004109_300 Hb_011628_030 Hb_011628_030 Hb_125876_010--Hb_011628_030 Hb_000163_310--Hb_007441_030 Hb_000163_310--Hb_000703_310 Hb_006364_010 Hb_006364_010 Hb_000163_310--Hb_006364_010 Hb_005228_090 Hb_005228_090 Hb_000163_310--Hb_005228_090 Hb_000163_310--Hb_002621_020 Hb_004693_030 Hb_004693_030 Hb_000163_310--Hb_004693_030 Hb_007441_030--Hb_000703_310 Hb_007441_030--Hb_002621_020 Hb_010139_010 Hb_010139_010 Hb_007441_030--Hb_010139_010 Hb_005656_090 Hb_005656_090 Hb_007441_030--Hb_005656_090 Hb_007441_030--Hb_006364_010 Hb_000703_310--Hb_002621_020 Hb_000703_310--Hb_010139_010 Hb_000703_310--Hb_005656_090 Hb_000703_310--Hb_006364_010 Hb_002621_020--Hb_010139_010 Hb_002621_020--Hb_005656_090 Hb_002621_020--Hb_006364_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.06163 0 0.0249424 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.16255 0

CAGE analysis