Hb_006364_010

Information

Type -
Description -
Location Contig6364: 29532-30161
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006364_010 0.0 - - -
2 Hb_005228_090 0.0006449347 - - PREDICTED: magnesium transporter MRS2-3-like [Citrus sinensis]
3 Hb_004693_030 0.0033476403 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
4 Hb_072368_010 0.0059865659 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
5 Hb_000163_310 0.0092635736 - - PREDICTED: ABC transporter C family member 4-like [Malus domestica]
6 Hb_007441_030 0.0144885869 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
7 Hb_008159_030 0.0156488457 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
8 Hb_000703_310 0.0173052454 - - -
9 Hb_002621_020 0.0206973533 - - -
10 Hb_010139_010 0.0276867736 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
11 Hb_000107_460 0.0282636655 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
12 Hb_005656_090 0.0286700656 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]
13 Hb_001504_290 0.0351152882 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
14 Hb_003724_030 0.0365831754 - - -
15 Hb_000526_130 0.0385173762 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
16 Hb_004918_040 0.0428730712 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003735_010 0.0449999892 - - -
18 Hb_008397_020 0.0451381868 - - polyprotein [Oryza australiensis]
19 Hb_009230_030 0.0458262608 - - -
20 Hb_001719_030 0.0458487275 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]

Gene co-expression network

sample Hb_006364_010 Hb_006364_010 Hb_005228_090 Hb_005228_090 Hb_006364_010--Hb_005228_090 Hb_004693_030 Hb_004693_030 Hb_006364_010--Hb_004693_030 Hb_072368_010 Hb_072368_010 Hb_006364_010--Hb_072368_010 Hb_000163_310 Hb_000163_310 Hb_006364_010--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_006364_010--Hb_007441_030 Hb_008159_030 Hb_008159_030 Hb_006364_010--Hb_008159_030 Hb_005228_090--Hb_004693_030 Hb_005228_090--Hb_072368_010 Hb_005228_090--Hb_000163_310 Hb_005228_090--Hb_008159_030 Hb_005228_090--Hb_007441_030 Hb_004693_030--Hb_072368_010 Hb_004693_030--Hb_008159_030 Hb_004693_030--Hb_000163_310 Hb_004693_030--Hb_007441_030 Hb_072368_010--Hb_008159_030 Hb_072368_010--Hb_000163_310 Hb_072368_010--Hb_007441_030 Hb_000163_310--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_000163_310--Hb_000703_310 Hb_002621_020 Hb_002621_020 Hb_000163_310--Hb_002621_020 Hb_007441_030--Hb_000703_310 Hb_007441_030--Hb_002621_020 Hb_010139_010 Hb_010139_010 Hb_007441_030--Hb_010139_010 Hb_005656_090 Hb_005656_090 Hb_007441_030--Hb_005656_090 Hb_000107_460 Hb_000107_460 Hb_008159_030--Hb_000107_460 Hb_001504_290 Hb_001504_290 Hb_008159_030--Hb_001504_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.345159 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.745065 0

CAGE analysis