Hb_007441_030

Information

Type -
Description -
Location Contig7441: 26488-27159
Sequence    

Annotation

kegg
ID cic:CICLE_v10022525mg
description hypothetical protein
nr
ID XP_012083712.1
description PREDICTED: uclacyanin-2-like [Jatropha curcas]
swissprot
ID Q41001
description Blue copper protein OS=Pisum sativum PE=2 SV=1
trembl
ID A0A067KAM9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14640 PE=4 SV=1
Gene Ontology
ID GO:0009055
description blue copper

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 010_E07.ab1: 7159-29881

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007441_030 0.0 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
2 Hb_000703_310 0.0028169688 - - -
3 Hb_000163_310 0.005225324 - - PREDICTED: ABC transporter C family member 4-like [Malus domestica]
4 Hb_002621_020 0.0062095816 - - -
5 Hb_010139_010 0.0132004884 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
6 Hb_005656_090 0.0141840372 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]
7 Hb_006364_010 0.0144885869 - - -
8 Hb_005228_090 0.0151334583 - - PREDICTED: magnesium transporter MRS2-3-like [Citrus sinensis]
9 Hb_004693_030 0.0178358388 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
10 Hb_072368_010 0.0204743534 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
11 Hb_004918_040 0.0283920358 - - conserved hypothetical protein [Ricinus communis]
12 Hb_008159_030 0.0301343245 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
13 Hb_003735_010 0.0305199049 - - -
14 Hb_008397_020 0.030658166 - - polyprotein [Oryza australiensis]
15 Hb_001719_030 0.0313690371 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_083377_010 0.0320234135 - - unnamed protein product [Vitis vinifera]
17 Hb_000107_460 0.0427441781 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
18 Hb_001504_290 0.0495921464 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
19 Hb_003724_030 0.051059161 - - -
20 Hb_000526_130 0.052992163 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]

Gene co-expression network

sample Hb_007441_030 Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_007441_030--Hb_000703_310 Hb_000163_310 Hb_000163_310 Hb_007441_030--Hb_000163_310 Hb_002621_020 Hb_002621_020 Hb_007441_030--Hb_002621_020 Hb_010139_010 Hb_010139_010 Hb_007441_030--Hb_010139_010 Hb_005656_090 Hb_005656_090 Hb_007441_030--Hb_005656_090 Hb_006364_010 Hb_006364_010 Hb_007441_030--Hb_006364_010 Hb_000703_310--Hb_002621_020 Hb_000703_310--Hb_000163_310 Hb_000703_310--Hb_010139_010 Hb_000703_310--Hb_005656_090 Hb_000703_310--Hb_006364_010 Hb_000163_310--Hb_006364_010 Hb_005228_090 Hb_005228_090 Hb_000163_310--Hb_005228_090 Hb_000163_310--Hb_002621_020 Hb_004693_030 Hb_004693_030 Hb_000163_310--Hb_004693_030 Hb_002621_020--Hb_010139_010 Hb_002621_020--Hb_005656_090 Hb_002621_020--Hb_006364_010 Hb_010139_010--Hb_005656_090 Hb_004918_040 Hb_004918_040 Hb_010139_010--Hb_004918_040 Hb_003735_010 Hb_003735_010 Hb_010139_010--Hb_003735_010 Hb_005656_090--Hb_004918_040 Hb_005656_090--Hb_003735_010 Hb_006364_010--Hb_005228_090 Hb_006364_010--Hb_004693_030 Hb_072368_010 Hb_072368_010 Hb_006364_010--Hb_072368_010 Hb_008159_030 Hb_008159_030 Hb_006364_010--Hb_008159_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0925194 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.185677 0

CAGE analysis