Hb_156949_010

Information

Type -
Description -
Location Contig156949: 8692-11050
Sequence    

Annotation

kegg
ID vvi:100263483
description (-)-alpha-terpineol synthase-like
nr
ID XP_012075360.1
description PREDICTED: terpene synthase 10-like [Jatropha curcas]
swissprot
ID B9T536
description Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1
trembl
ID A0A067KK14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=4 SV=1
Gene Ontology
ID GO:0000287
description terpene synthase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156949_010 0.0 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
2 Hb_002603_020 0.0343944598 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
3 Hb_125876_010 0.0528701553 - - unnamed protein product [Vitis vinifera]
4 Hb_005846_010 0.0599628194 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
5 Hb_181092_010 0.0700271405 - - unnamed protein product [Vitis vinifera]
6 Hb_004918_040 0.0720436969 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003735_010 0.0720451121 - - -
8 Hb_008397_020 0.0720473687 - - polyprotein [Oryza australiensis]
9 Hb_001719_030 0.0720631402 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_083377_010 0.0720838253 - - unnamed protein product [Vitis vinifera]
11 Hb_005656_090 0.073620049 transcription factor TF Family: NAC hypothetical protein CICLE_v10008885mg [Citrus clementina]
12 Hb_010139_010 0.0738286559 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
13 Hb_000856_350 0.0747672941 transcription factor TF Family: WRKY WRKY transcription factor 36 [Jatropha curcas]
14 Hb_002621_020 0.0756619316 - - -
15 Hb_000703_310 0.0767641889 - - -
16 Hb_007658_020 0.0768378295 - - Beta-amyrin synthase [Glycine soja]
17 Hb_000000_220 0.076952327 - - protein with unknown function [Ricinus communis]
18 Hb_007441_030 0.0777793507 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
19 Hb_007382_060 0.0782804068 - - -
20 Hb_004195_050 0.0782960121 - - -

Gene co-expression network

sample Hb_156949_010 Hb_156949_010 Hb_002603_020 Hb_002603_020 Hb_156949_010--Hb_002603_020 Hb_125876_010 Hb_125876_010 Hb_156949_010--Hb_125876_010 Hb_005846_010 Hb_005846_010 Hb_156949_010--Hb_005846_010 Hb_181092_010 Hb_181092_010 Hb_156949_010--Hb_181092_010 Hb_004918_040 Hb_004918_040 Hb_156949_010--Hb_004918_040 Hb_003735_010 Hb_003735_010 Hb_156949_010--Hb_003735_010 Hb_002603_020--Hb_125876_010 Hb_000163_310 Hb_000163_310 Hb_002603_020--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_002603_020--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_002603_020--Hb_000703_310 Hb_002621_020 Hb_002621_020 Hb_002603_020--Hb_002621_020 Hb_125876_010--Hb_005846_010 Hb_002743_030 Hb_002743_030 Hb_125876_010--Hb_002743_030 Hb_004109_300 Hb_004109_300 Hb_125876_010--Hb_004109_300 Hb_011628_030 Hb_011628_030 Hb_125876_010--Hb_011628_030 Hb_005846_010--Hb_002603_020 Hb_005550_070 Hb_005550_070 Hb_005846_010--Hb_005550_070 Hb_001168_080 Hb_001168_080 Hb_005846_010--Hb_001168_080 Hb_005846_010--Hb_011628_030 Hb_000856_350 Hb_000856_350 Hb_181092_010--Hb_000856_350 Hb_002677_010 Hb_002677_010 Hb_181092_010--Hb_002677_010 Hb_002986_110 Hb_002986_110 Hb_181092_010--Hb_002986_110 Hb_000185_060 Hb_000185_060 Hb_181092_010--Hb_000185_060 Hb_013654_010 Hb_013654_010 Hb_181092_010--Hb_013654_010 Hb_004918_040--Hb_003735_010 Hb_008397_020 Hb_008397_020 Hb_004918_040--Hb_008397_020 Hb_001719_030 Hb_001719_030 Hb_004918_040--Hb_001719_030 Hb_083377_010 Hb_083377_010 Hb_004918_040--Hb_083377_010 Hb_005656_090 Hb_005656_090 Hb_004918_040--Hb_005656_090 Hb_010139_010 Hb_010139_010 Hb_004918_040--Hb_010139_010 Hb_003735_010--Hb_008397_020 Hb_003735_010--Hb_001719_030 Hb_003735_010--Hb_083377_010 Hb_003735_010--Hb_005656_090 Hb_003735_010--Hb_010139_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.52372 0 0.100705 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.11515 0

CAGE analysis