Hb_010931_010

Information

Type -
Description -
Location Contig10931: 3238-3886
Sequence    

Annotation

kegg
ID rcu:RCOM_0303920
description hypothetical protein
nr
ID XP_012081780.1
description PREDICTED: protein YLS9-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LEP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010931_010 0.0 - - PREDICTED: protein YLS9-like [Jatropha curcas]
2 Hb_002890_400 0.0902315284 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
3 Hb_009012_020 0.1183428109 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
4 Hb_000522_040 0.1211833777 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
5 Hb_004463_040 0.1341134496 - - -
6 Hb_000684_020 0.1348824013 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
7 Hb_001902_180 0.1352196313 - - PREDICTED: uncharacterized protein LOC105129658 [Populus euphratica]
8 Hb_000976_020 0.1401019338 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
9 Hb_006446_060 0.1419290474 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
10 Hb_008225_080 0.1446805367 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
11 Hb_000189_260 0.1448974909 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004200_040 0.1449695789 - - laccase, putative [Ricinus communis]
13 Hb_000758_030 0.1450191581 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
14 Hb_000101_050 0.1454057575 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
15 Hb_041769_010 0.1472895204 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
16 Hb_110218_010 0.1475358575 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
17 Hb_161393_010 0.1491556133 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_001621_140 0.1515220585 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
19 Hb_003900_050 0.1518062979 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]
20 Hb_000411_060 0.1518703907 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]

Gene co-expression network

sample Hb_010931_010 Hb_010931_010 Hb_002890_400 Hb_002890_400 Hb_010931_010--Hb_002890_400 Hb_009012_020 Hb_009012_020 Hb_010931_010--Hb_009012_020 Hb_000522_040 Hb_000522_040 Hb_010931_010--Hb_000522_040 Hb_004463_040 Hb_004463_040 Hb_010931_010--Hb_004463_040 Hb_000684_020 Hb_000684_020 Hb_010931_010--Hb_000684_020 Hb_001902_180 Hb_001902_180 Hb_010931_010--Hb_001902_180 Hb_001357_260 Hb_001357_260 Hb_002890_400--Hb_001357_260 Hb_112082_030 Hb_112082_030 Hb_002890_400--Hb_112082_030 Hb_000189_260 Hb_000189_260 Hb_002890_400--Hb_000189_260 Hb_002890_400--Hb_009012_020 Hb_000411_060 Hb_000411_060 Hb_002890_400--Hb_000411_060 Hb_009012_020--Hb_001902_180 Hb_000046_060 Hb_000046_060 Hb_009012_020--Hb_000046_060 Hb_110218_010 Hb_110218_010 Hb_009012_020--Hb_110218_010 Hb_009012_020--Hb_004463_040 Hb_009012_020--Hb_000684_020 Hb_009012_020--Hb_000411_060 Hb_001621_140 Hb_001621_140 Hb_000522_040--Hb_001621_140 Hb_005653_020 Hb_005653_020 Hb_000522_040--Hb_005653_020 Hb_006446_060 Hb_006446_060 Hb_000522_040--Hb_006446_060 Hb_002234_150 Hb_002234_150 Hb_000522_040--Hb_002234_150 Hb_000251_100 Hb_000251_100 Hb_000522_040--Hb_000251_100 Hb_000522_040--Hb_009012_020 Hb_003900_050 Hb_003900_050 Hb_004463_040--Hb_003900_050 Hb_004200_040 Hb_004200_040 Hb_004463_040--Hb_004200_040 Hb_000976_020 Hb_000976_020 Hb_004463_040--Hb_000976_020 Hb_020332_040 Hb_020332_040 Hb_004463_040--Hb_020332_040 Hb_002048_010 Hb_002048_010 Hb_004463_040--Hb_002048_010 Hb_000684_020--Hb_110218_010 Hb_000684_020--Hb_004200_040 Hb_000684_020--Hb_004463_040 Hb_002553_120 Hb_002553_120 Hb_000684_020--Hb_002553_120 Hb_000684_020--Hb_003900_050 Hb_005993_070 Hb_005993_070 Hb_001902_180--Hb_005993_070 Hb_001902_180--Hb_006446_060 Hb_000101_050 Hb_000101_050 Hb_001902_180--Hb_000101_050 Hb_005731_080 Hb_005731_080 Hb_001902_180--Hb_005731_080 Hb_001902_180--Hb_000411_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.848435 0.0715741 0.148007 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.109089 0 0 3.06846 0.164475

CAGE analysis