Hb_049677_010

Information

Type -
Description -
Location Contig49677: 18-806
Sequence    

Annotation

kegg
ID cit:102623211
description putative disease resistance protein RGA1-like
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049677_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_009771_070 0.1150445818 - - hypothetical protein POPTR_0016s12140g [Populus trichocarpa]
3 Hb_003064_010 0.1341085457 - - Senescence-related gene 1 [Theobroma cacao]
4 Hb_000194_080 0.1453746839 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
5 Hb_004055_080 0.1473041823 - - calmodulin binding protein, putative [Ricinus communis]
6 Hb_000029_420 0.1483237435 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
7 Hb_001473_100 0.1533888048 - - chalcone synthase 1 [Jatropha curcas]
8 Hb_111985_160 0.1563483791 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
9 Hb_111693_010 0.1658382791 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
10 Hb_058526_010 0.1720740371 - - -
11 Hb_004021_100 0.1757449083 - - -
12 Hb_000402_220 0.177792789 - - multidrug resistance pump, putative [Ricinus communis]
13 Hb_131864_020 0.1833985221 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
14 Hb_001377_480 0.1856643305 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
15 Hb_031336_020 0.1873032477 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001623_400 0.1905365943 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002301_420 0.1909243697 transcription factor TF Family: bHLH hypothetical protein POPTR_0011s05320g [Populus trichocarpa]
18 Hb_000631_130 0.1911864685 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
19 Hb_000815_280 0.1912107168 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
20 Hb_000625_130 0.1914954946 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]

Gene co-expression network

sample Hb_049677_010 Hb_049677_010 Hb_009771_070 Hb_009771_070 Hb_049677_010--Hb_009771_070 Hb_003064_010 Hb_003064_010 Hb_049677_010--Hb_003064_010 Hb_000194_080 Hb_000194_080 Hb_049677_010--Hb_000194_080 Hb_004055_080 Hb_004055_080 Hb_049677_010--Hb_004055_080 Hb_000029_420 Hb_000029_420 Hb_049677_010--Hb_000029_420 Hb_001473_100 Hb_001473_100 Hb_049677_010--Hb_001473_100 Hb_000402_220 Hb_000402_220 Hb_009771_070--Hb_000402_220 Hb_004324_200 Hb_004324_200 Hb_009771_070--Hb_004324_200 Hb_009771_070--Hb_003064_010 Hb_031336_020 Hb_031336_020 Hb_009771_070--Hb_031336_020 Hb_009771_070--Hb_001473_100 Hb_003064_010--Hb_000194_080 Hb_003064_010--Hb_000029_420 Hb_004021_100 Hb_004021_100 Hb_003064_010--Hb_004021_100 Hb_001623_400 Hb_001623_400 Hb_003064_010--Hb_001623_400 Hb_003064_010--Hb_004055_080 Hb_000194_080--Hb_000029_420 Hb_000194_080--Hb_001473_100 Hb_002809_020 Hb_002809_020 Hb_000194_080--Hb_002809_020 Hb_000815_280 Hb_000815_280 Hb_000194_080--Hb_000815_280 Hb_000086_730 Hb_000086_730 Hb_000194_080--Hb_000086_730 Hb_111693_010 Hb_111693_010 Hb_004055_080--Hb_111693_010 Hb_000220_170 Hb_000220_170 Hb_004055_080--Hb_000220_170 Hb_058526_010 Hb_058526_010 Hb_004055_080--Hb_058526_010 Hb_004055_080--Hb_000029_420 Hb_004055_080--Hb_001473_100 Hb_005653_100 Hb_005653_100 Hb_004055_080--Hb_005653_100 Hb_111985_160 Hb_111985_160 Hb_000029_420--Hb_111985_160 Hb_000029_420--Hb_111693_010 Hb_001377_480 Hb_001377_480 Hb_000029_420--Hb_001377_480 Hb_000631_130 Hb_000631_130 Hb_001473_100--Hb_000631_130 Hb_025469_040 Hb_025469_040 Hb_001473_100--Hb_025469_040 Hb_131864_020 Hb_131864_020 Hb_001473_100--Hb_131864_020 Hb_000038_090 Hb_000038_090 Hb_001473_100--Hb_000038_090 Hb_007044_070 Hb_007044_070 Hb_001473_100--Hb_007044_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.177045 0.383943 0.346909 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.080905 0 0 1.60445 0

CAGE analysis