Hb_000631_130

Information

Type -
Description -
Location Contig631: 170215-172029
Sequence    

Annotation

kegg
ID vvi:100232999
description F3'H, VvF3'h4; flavonoid 3' hydroxylase
nr
ID XP_012080364.1
description PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
swissprot
ID Q9SBQ9
description Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1
trembl
ID A0A067KHL9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11710 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51837: 170125-171880
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000631_130 0.0 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
2 Hb_000038_090 0.0660923963 transcription factor TF Family: NAC hypothetical protein POPTR_0002s05820g [Populus trichocarpa]
3 Hb_001473_100 0.0669362836 - - chalcone synthase 1 [Jatropha curcas]
4 Hb_025469_040 0.080568353 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
5 Hb_007044_070 0.0812131107 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
6 Hb_000933_200 0.1060343737 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
7 Hb_131864_020 0.1090171597 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
8 Hb_001168_010 0.1126026182 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
9 Hb_007747_030 0.1220495708 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
10 Hb_000407_110 0.1266704265 - - ripening-induced ACC oxidase [Carica papaya]
11 Hb_000069_050 0.1278107965 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
12 Hb_148914_010 0.128389492 - - glutathione s-transferase, putative [Ricinus communis]
13 Hb_003253_020 0.1301964556 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
14 Hb_005653_100 0.1306490467 - - hypothetical protein POPTR_0004s19580g [Populus trichocarpa]
15 Hb_156144_040 0.1311505804 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
16 Hb_000625_130 0.1319880613 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
17 Hb_000327_300 0.1327965042 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
18 Hb_000245_140 0.1351183517 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
19 Hb_004055_080 0.1371513429 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_142522_030 0.1385282387 - - hypothetical protein JCGZ_21596 [Jatropha curcas]

Gene co-expression network

sample Hb_000631_130 Hb_000631_130 Hb_000038_090 Hb_000038_090 Hb_000631_130--Hb_000038_090 Hb_001473_100 Hb_001473_100 Hb_000631_130--Hb_001473_100 Hb_025469_040 Hb_025469_040 Hb_000631_130--Hb_025469_040 Hb_007044_070 Hb_007044_070 Hb_000631_130--Hb_007044_070 Hb_000933_200 Hb_000933_200 Hb_000631_130--Hb_000933_200 Hb_131864_020 Hb_131864_020 Hb_000631_130--Hb_131864_020 Hb_000038_090--Hb_001473_100 Hb_000038_090--Hb_000933_200 Hb_000327_300 Hb_000327_300 Hb_000038_090--Hb_000327_300 Hb_007747_030 Hb_007747_030 Hb_000038_090--Hb_007747_030 Hb_000407_110 Hb_000407_110 Hb_000038_090--Hb_000407_110 Hb_001473_100--Hb_025469_040 Hb_001473_100--Hb_131864_020 Hb_004055_080 Hb_004055_080 Hb_001473_100--Hb_004055_080 Hb_001473_100--Hb_007044_070 Hb_025469_040--Hb_131864_020 Hb_025469_040--Hb_007044_070 Hb_000625_130 Hb_000625_130 Hb_025469_040--Hb_000625_130 Hb_148914_010 Hb_148914_010 Hb_025469_040--Hb_148914_010 Hb_007044_070--Hb_131864_020 Hb_001936_030 Hb_001936_030 Hb_007044_070--Hb_001936_030 Hb_142522_030 Hb_142522_030 Hb_007044_070--Hb_142522_030 Hb_003253_020 Hb_003253_020 Hb_000933_200--Hb_003253_020 Hb_000617_340 Hb_000617_340 Hb_000933_200--Hb_000617_340 Hb_010407_120 Hb_010407_120 Hb_000933_200--Hb_010407_120 Hb_000513_110 Hb_000513_110 Hb_000933_200--Hb_000513_110 Hb_001544_040 Hb_001544_040 Hb_000933_200--Hb_001544_040 Hb_003786_060 Hb_003786_060 Hb_000933_200--Hb_003786_060 Hb_000815_280 Hb_000815_280 Hb_131864_020--Hb_000815_280 Hb_000589_100 Hb_000589_100 Hb_131864_020--Hb_000589_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.17837 28.4509 55.7609 23.4386 0.183312 0.0977424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.42261 0.379982 0.134007 357.371 1.29335

CAGE analysis