Hb_142522_030

Information

Type -
Description -
Location Contig142522: 23392-23925
Sequence    

Annotation

kegg
ID rcu:RCOM_1250320
description hypothetical protein
nr
ID KDP21125.1
description hypothetical protein JCGZ_21596 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMA1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21596 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142522_030 0.0 - - hypothetical protein JCGZ_21596 [Jatropha curcas]
2 Hb_000625_130 0.1000790939 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
3 Hb_001101_020 0.1145777427 - - hypothetical protein RCOM_0615680 [Ricinus communis]
4 Hb_001377_480 0.1188937323 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
5 Hb_000917_330 0.1261947271 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
6 Hb_131864_020 0.1265484025 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
7 Hb_007044_070 0.1290196752 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
8 Hb_025469_040 0.1291540065 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
9 Hb_187211_010 0.1322524226 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
10 Hb_000815_280 0.1336928098 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
11 Hb_001473_100 0.1360012689 - - chalcone synthase 1 [Jatropha curcas]
12 Hb_000631_130 0.1385282387 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
13 Hb_001936_030 0.1410635592 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
14 Hb_000029_420 0.1425053224 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
15 Hb_004055_080 0.1511072906 - - calmodulin binding protein, putative [Ricinus communis]
16 Hb_000194_080 0.1521806509 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
17 Hb_001775_050 0.1524390001 - - ribosome-inactivating protein cucurmosin-like [Jatropha curcas]
18 Hb_111985_120 0.1546732215 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
19 Hb_005653_100 0.1571844742 - - hypothetical protein POPTR_0004s19580g [Populus trichocarpa]
20 Hb_001691_060 0.160932081 - - lipoxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_142522_030 Hb_142522_030 Hb_000625_130 Hb_000625_130 Hb_142522_030--Hb_000625_130 Hb_001101_020 Hb_001101_020 Hb_142522_030--Hb_001101_020 Hb_001377_480 Hb_001377_480 Hb_142522_030--Hb_001377_480 Hb_000917_330 Hb_000917_330 Hb_142522_030--Hb_000917_330 Hb_131864_020 Hb_131864_020 Hb_142522_030--Hb_131864_020 Hb_007044_070 Hb_007044_070 Hb_142522_030--Hb_007044_070 Hb_000625_130--Hb_000917_330 Hb_001936_030 Hb_001936_030 Hb_000625_130--Hb_001936_030 Hb_000625_130--Hb_001377_480 Hb_025469_040 Hb_025469_040 Hb_000625_130--Hb_025469_040 Hb_003166_020 Hb_003166_020 Hb_000625_130--Hb_003166_020 Hb_001101_020--Hb_001377_480 Hb_111985_120 Hb_111985_120 Hb_001101_020--Hb_111985_120 Hb_001789_010 Hb_001789_010 Hb_001101_020--Hb_001789_010 Hb_187211_010 Hb_187211_010 Hb_001101_020--Hb_187211_010 Hb_129204_050 Hb_129204_050 Hb_001101_020--Hb_129204_050 Hb_001377_480--Hb_187211_010 Hb_001377_480--Hb_111985_120 Hb_001377_480--Hb_001789_010 Hb_000917_330--Hb_001936_030 Hb_000917_330--Hb_003166_020 Hb_001691_060 Hb_001691_060 Hb_000917_330--Hb_001691_060 Hb_000075_030 Hb_000075_030 Hb_000917_330--Hb_000075_030 Hb_000917_330--Hb_025469_040 Hb_131864_020--Hb_025469_040 Hb_001473_100 Hb_001473_100 Hb_131864_020--Hb_001473_100 Hb_131864_020--Hb_007044_070 Hb_000631_130 Hb_000631_130 Hb_131864_020--Hb_000631_130 Hb_000815_280 Hb_000815_280 Hb_131864_020--Hb_000815_280 Hb_000589_100 Hb_000589_100 Hb_131864_020--Hb_000589_100 Hb_007044_070--Hb_000631_130 Hb_007044_070--Hb_025469_040 Hb_007044_070--Hb_001473_100 Hb_007044_070--Hb_001936_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.301467 1.91544 9.79068 3.5132 0.399548 0.087753
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 33.8377 0.359572

CAGE analysis