Hb_000625_130

Information

Type -
Description -
Location Contig625: 147818-150264
Sequence    

Annotation

kegg
ID vvi:100233079
description F3H, FHT; flavanone 3-hydroxylase (EC:1.14.11.9)
nr
ID XP_012065916.1
description PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
swissprot
ID P41090
description Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1
trembl
ID A0A067LEF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06540 PE=3 SV=1
Gene Ontology
ID GO:0031418
description flavanone 3-hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51644: 147819-150347
cDNA
(Sanger)
(ID:Location)		 040_P01.ab1: 149581-150347

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000625_130 0.0 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
2 Hb_000917_330 0.0520554726 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
3 Hb_001936_030 0.0893002081 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
4 Hb_142522_030 0.1000790939 - - hypothetical protein JCGZ_21596 [Jatropha curcas]
5 Hb_001377_480 0.1012170915 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
6 Hb_025469_040 0.1015354564 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
7 Hb_003166_020 0.1143537666 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
8 Hb_001691_060 0.115773279 - - lipoxygenase, putative [Ricinus communis]
9 Hb_001473_100 0.1168131997 - - chalcone synthase 1 [Jatropha curcas]
10 Hb_000815_280 0.1181200212 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
11 Hb_131864_020 0.1220774672 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
12 Hb_187211_010 0.1275591402 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
13 Hb_001101_020 0.1306567711 - - hypothetical protein RCOM_0615680 [Ricinus communis]
14 Hb_007044_070 0.1312115722 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
15 Hb_000631_130 0.1319880613 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
16 Hb_000075_030 0.1328866497 - - PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
17 Hb_000194_080 0.1346845783 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
18 Hb_001775_050 0.1383320573 - - ribosome-inactivating protein cucurmosin-like [Jatropha curcas]
19 Hb_032621_010 0.1414035176 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
20 Hb_000668_070 0.1469674567 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000625_130 Hb_000625_130 Hb_000917_330 Hb_000917_330 Hb_000625_130--Hb_000917_330 Hb_001936_030 Hb_001936_030 Hb_000625_130--Hb_001936_030 Hb_142522_030 Hb_142522_030 Hb_000625_130--Hb_142522_030 Hb_001377_480 Hb_001377_480 Hb_000625_130--Hb_001377_480 Hb_025469_040 Hb_025469_040 Hb_000625_130--Hb_025469_040 Hb_003166_020 Hb_003166_020 Hb_000625_130--Hb_003166_020 Hb_000917_330--Hb_001936_030 Hb_000917_330--Hb_003166_020 Hb_001691_060 Hb_001691_060 Hb_000917_330--Hb_001691_060 Hb_000075_030 Hb_000075_030 Hb_000917_330--Hb_000075_030 Hb_000917_330--Hb_025469_040 Hb_002248_020 Hb_002248_020 Hb_001936_030--Hb_002248_020 Hb_001936_030--Hb_025469_040 Hb_007044_070 Hb_007044_070 Hb_001936_030--Hb_007044_070 Hb_004774_060 Hb_004774_060 Hb_001936_030--Hb_004774_060 Hb_001101_020 Hb_001101_020 Hb_142522_030--Hb_001101_020 Hb_142522_030--Hb_001377_480 Hb_142522_030--Hb_000917_330 Hb_131864_020 Hb_131864_020 Hb_142522_030--Hb_131864_020 Hb_142522_030--Hb_007044_070 Hb_187211_010 Hb_187211_010 Hb_001377_480--Hb_187211_010 Hb_111985_120 Hb_111985_120 Hb_001377_480--Hb_111985_120 Hb_001789_010 Hb_001789_010 Hb_001377_480--Hb_001789_010 Hb_001377_480--Hb_001101_020 Hb_025469_040--Hb_131864_020 Hb_001473_100 Hb_001473_100 Hb_025469_040--Hb_001473_100 Hb_000631_130 Hb_000631_130 Hb_025469_040--Hb_000631_130 Hb_025469_040--Hb_007044_070 Hb_148914_010 Hb_148914_010 Hb_025469_040--Hb_148914_010 Hb_032621_010 Hb_032621_010 Hb_003166_020--Hb_032621_010 Hb_026650_010 Hb_026650_010 Hb_003166_020--Hb_026650_010 Hb_000800_060 Hb_000800_060 Hb_003166_020--Hb_000800_060 Hb_000668_070 Hb_000668_070 Hb_003166_020--Hb_000668_070 Hb_069151_010 Hb_069151_010 Hb_003166_020--Hb_069151_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0984261 29.9809 215.866 94.0693 0 0.0169418
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.336915 0.0588968 0.714531 817.309 15.2303

CAGE analysis