Hb_013652_010

Information

Type -
Description -
Location Contig13652: 2270-3730
Sequence    

Annotation

kegg
ID rcu:RCOM_0812180
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002518708.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9AT54
description Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=1
trembl
ID B9RYC4
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0812180 PE=3 SV=1
Gene Ontology
ID GO:0047213
description scopoletin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10051: 2271-2752 , PASA_asmbl_10052: 2867-3318
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013652_010 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_002374_110 0.113858998 - - PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]
3 Hb_002376_030 0.1183360469 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_006919_010 0.1255241737 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Vitis vinifera]
5 Hb_000407_110 0.1470799152 - - ripening-induced ACC oxidase [Carica papaya]
6 Hb_127743_030 0.1510825157 - - amino acid transporter, putative [Ricinus communis]
7 Hb_003166_040 0.1514330414 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
8 Hb_002272_160 0.1539041196 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
9 Hb_007483_030 0.1566690084 - - -
10 Hb_001609_080 0.1584927312 - - hypothetical protein POPTR_0017s05660g [Populus trichocarpa]
11 Hb_000462_020 0.1598518648 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_003581_240 0.1601308506 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_002027_310 0.1620492001 - - conserved hypothetical protein [Ricinus communis]
14 Hb_058526_010 0.1635332186 - - -
15 Hb_027288_010 0.1636310912 - - mutt domain protein, putative [Ricinus communis]
16 Hb_008225_080 0.1648834392 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
17 Hb_002843_010 0.1661647086 - - hypothetical protein EUGRSUZ_H04984, partial [Eucalyptus grandis]
18 Hb_005653_100 0.1702671274 - - hypothetical protein POPTR_0004s19580g [Populus trichocarpa]
19 Hb_004586_080 0.1731181319 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
20 Hb_007432_050 0.1763594603 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108 [Jatropha curcas]

Gene co-expression network

sample Hb_013652_010 Hb_013652_010 Hb_002374_110 Hb_002374_110 Hb_013652_010--Hb_002374_110 Hb_002376_030 Hb_002376_030 Hb_013652_010--Hb_002376_030 Hb_006919_010 Hb_006919_010 Hb_013652_010--Hb_006919_010 Hb_000407_110 Hb_000407_110 Hb_013652_010--Hb_000407_110 Hb_127743_030 Hb_127743_030 Hb_013652_010--Hb_127743_030 Hb_003166_040 Hb_003166_040 Hb_013652_010--Hb_003166_040 Hb_002374_110--Hb_127743_030 Hb_002374_110--Hb_003166_040 Hb_002374_110--Hb_006919_010 Hb_058526_010 Hb_058526_010 Hb_002374_110--Hb_058526_010 Hb_007483_030 Hb_007483_030 Hb_002374_110--Hb_007483_030 Hb_027288_010 Hb_027288_010 Hb_002374_110--Hb_027288_010 Hb_002376_030--Hb_006919_010 Hb_002376_030--Hb_002374_110 Hb_002376_030--Hb_007483_030 Hb_002376_030--Hb_000407_110 Hb_003581_240 Hb_003581_240 Hb_002376_030--Hb_003581_240 Hb_006919_010--Hb_000407_110 Hb_001609_080 Hb_001609_080 Hb_006919_010--Hb_001609_080 Hb_006919_010--Hb_007483_030 Hb_006919_010--Hb_003166_040 Hb_000407_110--Hb_001609_080 Hb_000407_110--Hb_007483_030 Hb_008080_040 Hb_008080_040 Hb_000407_110--Hb_008080_040 Hb_005653_100 Hb_005653_100 Hb_000407_110--Hb_005653_100 Hb_004586_080 Hb_004586_080 Hb_000407_110--Hb_004586_080 Hb_127743_030--Hb_003166_040 Hb_127743_030--Hb_058526_010 Hb_007432_050 Hb_007432_050 Hb_127743_030--Hb_007432_050 Hb_127743_030--Hb_027288_010 Hb_127743_030--Hb_007483_030 Hb_003166_040--Hb_058526_010 Hb_003166_040--Hb_027288_010 Hb_003166_040--Hb_007483_030 Hb_003166_040--Hb_007432_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.179495 12.1383 7.10133 2.5599 0.278496 0.308787
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.804816 0.329244 0.0475344 37.2968 0.0529249

CAGE analysis