Hb_001863_100

Information

Type -
Description -
Location Contig1863: 58951-59406
Sequence    

Annotation

kegg
ID rcu:RCOM_1037270
description hypothetical protein
nr
ID XP_002513964.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJP5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1037270 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000333_130 0.1409122574 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
3 Hb_003938_010 0.1551654016 transcription factor TF Family: ERF Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
4 Hb_012055_100 0.1616420879 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
5 Hb_005081_080 0.1618555131 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
6 Hb_000703_320 0.1636612996 - - receptor-kinase, putative [Ricinus communis]
7 Hb_000260_320 0.1638867587 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
8 Hb_000417_290 0.1652951726 - - conserved hypothetical protein [Ricinus communis]
9 Hb_135811_060 0.1668919099 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_001073_060 0.1673534003 - - phosphate transporter 1 [Hevea brasiliensis]
11 Hb_151281_010 0.1692978915 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
12 Hb_131591_010 0.1702779675 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
13 Hb_000532_060 0.170848864 - - copper-transporting atpase p-type, putative [Ricinus communis]
14 Hb_000170_230 0.1717781427 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
15 Hb_046117_050 0.1726744724 transcription factor TF Family: C2H2 hypothetical protein POPTR_0009s14590g [Populus trichocarpa]
16 Hb_001021_140 0.1743626863 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
17 Hb_001691_190 0.1768291529 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000935_070 0.1783809117 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
19 Hb_079955_010 0.1792542116 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
20 Hb_106969_010 0.1793973287 - - Cytochrome P450 76C4 [Glycine soja]

Gene co-expression network

sample Hb_001863_100 Hb_001863_100 Hb_000333_130 Hb_000333_130 Hb_001863_100--Hb_000333_130 Hb_003938_010 Hb_003938_010 Hb_001863_100--Hb_003938_010 Hb_012055_100 Hb_012055_100 Hb_001863_100--Hb_012055_100 Hb_005081_080 Hb_005081_080 Hb_001863_100--Hb_005081_080 Hb_000703_320 Hb_000703_320 Hb_001863_100--Hb_000703_320 Hb_000260_320 Hb_000260_320 Hb_001863_100--Hb_000260_320 Hb_106969_010 Hb_106969_010 Hb_000333_130--Hb_106969_010 Hb_011791_010 Hb_011791_010 Hb_000333_130--Hb_011791_010 Hb_149056_010 Hb_149056_010 Hb_000333_130--Hb_149056_010 Hb_001009_110 Hb_001009_110 Hb_000333_130--Hb_001009_110 Hb_001073_060 Hb_001073_060 Hb_000333_130--Hb_001073_060 Hb_002219_090 Hb_002219_090 Hb_000333_130--Hb_002219_090 Hb_000045_180 Hb_000045_180 Hb_003938_010--Hb_000045_180 Hb_000856_240 Hb_000856_240 Hb_003938_010--Hb_000856_240 Hb_000255_020 Hb_000255_020 Hb_003938_010--Hb_000255_020 Hb_003938_010--Hb_001073_060 Hb_001838_010 Hb_001838_010 Hb_003938_010--Hb_001838_010 Hb_135811_060 Hb_135811_060 Hb_003938_010--Hb_135811_060 Hb_012055_100--Hb_000260_320 Hb_000877_090 Hb_000877_090 Hb_012055_100--Hb_000877_090 Hb_046117_050 Hb_046117_050 Hb_012055_100--Hb_046117_050 Hb_000532_060 Hb_000532_060 Hb_012055_100--Hb_000532_060 Hb_001487_020 Hb_001487_020 Hb_012055_100--Hb_001487_020 Hb_150643_010 Hb_150643_010 Hb_012055_100--Hb_150643_010 Hb_005081_080--Hb_001487_020 Hb_081448_010 Hb_081448_010 Hb_005081_080--Hb_081448_010 Hb_005081_080--Hb_046117_050 Hb_001021_140 Hb_001021_140 Hb_005081_080--Hb_001021_140 Hb_000170_230 Hb_000170_230 Hb_005081_080--Hb_000170_230 Hb_069232_010 Hb_069232_010 Hb_005081_080--Hb_069232_010 Hb_000703_320--Hb_081448_010 Hb_000703_320--Hb_069232_010 Hb_000431_180 Hb_000431_180 Hb_000703_320--Hb_000431_180 Hb_005380_030 Hb_005380_030 Hb_000703_320--Hb_005380_030 Hb_000703_320--Hb_135811_060 Hb_000703_320--Hb_001021_140 Hb_000260_320--Hb_000877_090 Hb_003376_340 Hb_003376_340 Hb_000260_320--Hb_003376_340 Hb_000260_320--Hb_046117_050 Hb_003253_060 Hb_003253_060 Hb_000260_320--Hb_003253_060 Hb_047690_010 Hb_047690_010 Hb_000260_320--Hb_047690_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 29.8741 1.2398 6.6894 0 0.145232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.313673 1.23194 0.20444 14.8961 0

CAGE analysis