Hb_183209_010

Information

Type -
Description -
Location Contig183209: 4024-5792
Sequence    

Annotation

kegg
ID rcu:RCOM_0611040
description Leucine-rich repeat receptor protein kinase EXS precursor, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012089395.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
swissprot
ID Q9LVP0
description Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=2 SV=1
trembl
ID A0A067JIJ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23589 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable leucine-rich repeat receptor-like protein kinase at5g63930

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183209_010 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
2 Hb_000935_070 0.1514290914 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
3 Hb_006198_140 0.1610305477 - - hypothetical protein L484_015208 [Morus notabilis]
4 Hb_000077_470 0.1950956059 - - PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
5 Hb_006198_150 0.2040448595 - - -
6 Hb_001021_140 0.2090887482 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
7 Hb_002019_030 0.2186588482 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_001157_150 0.2203759144 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
9 Hb_001329_040 0.2213344482 - - hypothetical protein RCOM_1345340 [Ricinus communis]
10 Hb_005081_080 0.2234311431 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
11 Hb_009083_080 0.2242227674 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000260_320 0.2264579629 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
13 Hb_007729_010 0.2287649078 - - unnamed protein product [Vitis vinifera]
14 Hb_003253_060 0.2317852728 - - PREDICTED: tropinone reductase-like 1 [Vitis vinifera]
15 Hb_002003_020 0.2318251086 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
16 Hb_000149_070 0.2333065981 - - PREDICTED: uncharacterized protein At5g39570 isoform X1 [Jatropha curcas]
17 Hb_004136_050 0.2334975305 - - -
18 Hb_000334_250 0.2349639277 - - Polygalacturonase precursor, putative [Ricinus communis]
19 Hb_081448_010 0.2373257012 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
20 Hb_002215_010 0.238005216 - - receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_183209_010 Hb_183209_010 Hb_000935_070 Hb_000935_070 Hb_183209_010--Hb_000935_070 Hb_006198_140 Hb_006198_140 Hb_183209_010--Hb_006198_140 Hb_000077_470 Hb_000077_470 Hb_183209_010--Hb_000077_470 Hb_006198_150 Hb_006198_150 Hb_183209_010--Hb_006198_150 Hb_001021_140 Hb_001021_140 Hb_183209_010--Hb_001021_140 Hb_002019_030 Hb_002019_030 Hb_183209_010--Hb_002019_030 Hb_000935_070--Hb_001021_140 Hb_000077_460 Hb_000077_460 Hb_000935_070--Hb_000077_460 Hb_004341_010 Hb_004341_010 Hb_000935_070--Hb_004341_010 Hb_003556_060 Hb_003556_060 Hb_000935_070--Hb_003556_060 Hb_001283_010 Hb_001283_010 Hb_000935_070--Hb_001283_010 Hb_028207_030 Hb_028207_030 Hb_000935_070--Hb_028207_030 Hb_006198_140--Hb_000935_070 Hb_001227_020 Hb_001227_020 Hb_006198_140--Hb_001227_020 Hb_001558_070 Hb_001558_070 Hb_006198_140--Hb_001558_070 Hb_006198_140--Hb_001021_140 Hb_001863_100 Hb_001863_100 Hb_006198_140--Hb_001863_100 Hb_009083_080 Hb_009083_080 Hb_000077_470--Hb_009083_080 Hb_003253_060 Hb_003253_060 Hb_000077_470--Hb_003253_060 Hb_001157_150 Hb_001157_150 Hb_000077_470--Hb_001157_150 Hb_000077_470--Hb_001021_140 Hb_005081_080 Hb_005081_080 Hb_000077_470--Hb_005081_080 Hb_006418_010 Hb_006418_010 Hb_000077_470--Hb_006418_010 Hb_017987_040 Hb_017987_040 Hb_006198_150--Hb_017987_040 Hb_007729_010 Hb_007729_010 Hb_006198_150--Hb_007729_010 Hb_006198_150--Hb_002019_030 Hb_000836_510 Hb_000836_510 Hb_006198_150--Hb_000836_510 Hb_000185_060 Hb_000185_060 Hb_006198_150--Hb_000185_060 Hb_000856_350 Hb_000856_350 Hb_006198_150--Hb_000856_350 Hb_081448_010 Hb_081448_010 Hb_001021_140--Hb_081448_010 Hb_031862_090 Hb_031862_090 Hb_001021_140--Hb_031862_090 Hb_001021_140--Hb_005081_080 Hb_000703_320 Hb_000703_320 Hb_001021_140--Hb_000703_320 Hb_001021_140--Hb_004341_010 Hb_002019_030--Hb_006418_010 Hb_004656_020 Hb_004656_020 Hb_002019_030--Hb_004656_020 Hb_002019_030--Hb_003253_060 Hb_000877_090 Hb_000877_090 Hb_002019_030--Hb_000877_090 Hb_001114_210 Hb_001114_210 Hb_002019_030--Hb_001114_210 Hb_002019_030--Hb_009083_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.187603 0 0.0532578 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0314462 0 0 0.177765 0

CAGE analysis