Hb_064885_020

Information

Type -
Description -
Location Contig64885: 13741-15557
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064885_020 0.0 - - -
2 Hb_000099_220 0.2086027432 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
3 Hb_024505_050 0.2364023143 transcription factor TF Family: ERF PPLZ02 family protein [Populus trichocarpa]
4 Hb_024404_010 0.2454441129 - - PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
5 Hb_034299_040 0.2515993054 - - aldo-keto reductase, putative [Ricinus communis]
6 Hb_000792_070 0.252925563 - - Ataxin-3, putative [Ricinus communis]
7 Hb_000099_210 0.255751679 - - PREDICTED: uncharacterized protein LOC105645736 [Jatropha curcas]
8 Hb_146006_010 0.2586996406 - - PREDICTED: uncharacterized protein LOC104091534 [Nicotiana tomentosiformis]
9 Hb_003768_040 0.265240735 - - ubiquitin-protein ligase, putative [Ricinus communis]
10 Hb_000920_270 0.2673116947 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_24521 [Jatropha curcas]
11 Hb_002759_280 0.2690379246 - - PREDICTED: uncharacterized protein LOC105649824 [Jatropha curcas]
12 Hb_000406_040 0.2713470125 - - PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like protein 5 [Jatropha curcas]
13 Hb_104812_030 0.2745631135 - - hypothetical protein POPTR_0178s00210g [Populus trichocarpa]
14 Hb_127003_010 0.2746154687 - - PREDICTED: uncharacterized protein LOC105633613 [Jatropha curcas]
15 Hb_000364_180 0.2760211019 - - PREDICTED: PI-PLC X domain-containing protein At5g67130 [Jatropha curcas]
16 Hb_011218_060 0.2775491015 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
17 Hb_005803_010 0.2795327944 - - PREDICTED: probable zinc metallopeptidase EGY3, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_000331_150 0.2797714698 - - WD-repeat protein, putative [Ricinus communis]
19 Hb_002890_210 0.280021943 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
20 Hb_001143_240 0.2821068699 - - 8-oxoguanine DNA glycosylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_064885_020 Hb_064885_020 Hb_000099_220 Hb_000099_220 Hb_064885_020--Hb_000099_220 Hb_024505_050 Hb_024505_050 Hb_064885_020--Hb_024505_050 Hb_024404_010 Hb_024404_010 Hb_064885_020--Hb_024404_010 Hb_034299_040 Hb_034299_040 Hb_064885_020--Hb_034299_040 Hb_000792_070 Hb_000792_070 Hb_064885_020--Hb_000792_070 Hb_000099_210 Hb_000099_210 Hb_064885_020--Hb_000099_210 Hb_003768_040 Hb_003768_040 Hb_000099_220--Hb_003768_040 Hb_000857_050 Hb_000857_050 Hb_000099_220--Hb_000857_050 Hb_000590_030 Hb_000590_030 Hb_000099_220--Hb_000590_030 Hb_002450_110 Hb_002450_110 Hb_000099_220--Hb_002450_110 Hb_104812_030 Hb_104812_030 Hb_000099_220--Hb_104812_030 Hb_001329_240 Hb_001329_240 Hb_024505_050--Hb_001329_240 Hb_006816_170 Hb_006816_170 Hb_024505_050--Hb_006816_170 Hb_002489_010 Hb_002489_010 Hb_024505_050--Hb_002489_010 Hb_024505_050--Hb_034299_040 Hb_002131_040 Hb_002131_040 Hb_024505_050--Hb_002131_040 Hb_004342_030 Hb_004342_030 Hb_024505_050--Hb_004342_030 Hb_104812_010 Hb_104812_010 Hb_024404_010--Hb_104812_010 Hb_007333_030 Hb_007333_030 Hb_024404_010--Hb_007333_030 Hb_135611_010 Hb_135611_010 Hb_024404_010--Hb_135611_010 Hb_148909_010 Hb_148909_010 Hb_024404_010--Hb_148909_010 Hb_002255_070 Hb_002255_070 Hb_024404_010--Hb_002255_070 Hb_000187_090 Hb_000187_090 Hb_024404_010--Hb_000187_090 Hb_002759_280 Hb_002759_280 Hb_034299_040--Hb_002759_280 Hb_004440_100 Hb_004440_100 Hb_034299_040--Hb_004440_100 Hb_051407_010 Hb_051407_010 Hb_034299_040--Hb_051407_010 Hb_000398_190 Hb_000398_190 Hb_034299_040--Hb_000398_190 Hb_001252_080 Hb_001252_080 Hb_034299_040--Hb_001252_080 Hb_109168_010 Hb_109168_010 Hb_034299_040--Hb_109168_010 Hb_000116_300 Hb_000116_300 Hb_000792_070--Hb_000116_300 Hb_001136_090 Hb_001136_090 Hb_000792_070--Hb_001136_090 Hb_007101_170 Hb_007101_170 Hb_000792_070--Hb_007101_170 Hb_001894_150 Hb_001894_150 Hb_000792_070--Hb_001894_150 Hb_000676_110 Hb_000676_110 Hb_000792_070--Hb_000676_110 Hb_000792_070--Hb_148909_010 Hb_007603_010 Hb_007603_010 Hb_000099_210--Hb_007603_010 Hb_008406_140 Hb_008406_140 Hb_000099_210--Hb_008406_140 Hb_005976_050 Hb_005976_050 Hb_000099_210--Hb_005976_050 Hb_000031_150 Hb_000031_150 Hb_000099_210--Hb_000031_150 Hb_002102_030 Hb_002102_030 Hb_000099_210--Hb_002102_030 Hb_007810_100 Hb_007810_100 Hb_000099_210--Hb_007810_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.85547 0.442182 0.394618 0.461297 3.43211 1.02024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.884489 2.09628 2.1895 0

CAGE analysis