Hb_148909_010

Information

Type -
Description -
Location Contig148909: 10593-27643
Sequence    

Annotation

kegg
ID rcu:RCOM_0799000
description hypothetical protein
nr
ID XP_012077342.1
description PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KD37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07712 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12377: 10895-27454 , PASA_asmbl_12378: 10771-27454
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148909_010 0.0 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
2 Hb_002255_050 0.0827049832 - - PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Jatropha curcas]
3 Hb_004306_080 0.0999451343 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
4 Hb_135611_010 0.1026248983 - - PREDICTED: uncharacterized protein LOC105142085 [Populus euphratica]
5 Hb_001930_010 0.1039948771 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
6 Hb_002255_070 0.1058553751 - - PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Camelina sativa]
7 Hb_000088_130 0.1058717891 - - hypothetical protein JCGZ_02447 [Jatropha curcas]
8 Hb_005321_020 0.1070792358 - - splicing factor-related family protein [Populus trichocarpa]
9 Hb_006831_110 0.108018749 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
10 Hb_000700_140 0.1087792408 - - PREDICTED: guanine nucleotide-binding protein-like NSN1 [Jatropha curcas]
11 Hb_001599_030 0.1096700056 - - PREDICTED: valine--tRNA ligase [Jatropha curcas]
12 Hb_006449_050 0.1104075981 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX2-like [Jatropha curcas]
13 Hb_004627_060 0.1113482891 - - PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]
14 Hb_002131_020 0.1114347396 transcription factor TF Family: IWS1 PREDICTED: protein IWS1 homolog [Jatropha curcas]
15 Hb_000320_200 0.1115395856 - - PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Jatropha curcas]
16 Hb_028639_010 0.111581514 - - transporter, putative [Ricinus communis]
17 Hb_007904_160 0.1116349352 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
18 Hb_000514_060 0.1122409227 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG isoform X1 [Jatropha curcas]
19 Hb_000796_040 0.1123263687 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_000244_250 0.1133932227 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 38 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_148909_010 Hb_148909_010 Hb_002255_050 Hb_002255_050 Hb_148909_010--Hb_002255_050 Hb_004306_080 Hb_004306_080 Hb_148909_010--Hb_004306_080 Hb_135611_010 Hb_135611_010 Hb_148909_010--Hb_135611_010 Hb_001930_010 Hb_001930_010 Hb_148909_010--Hb_001930_010 Hb_002255_070 Hb_002255_070 Hb_148909_010--Hb_002255_070 Hb_000088_130 Hb_000088_130 Hb_148909_010--Hb_000088_130 Hb_000283_070 Hb_000283_070 Hb_002255_050--Hb_000283_070 Hb_006831_110 Hb_006831_110 Hb_002255_050--Hb_006831_110 Hb_022408_010 Hb_022408_010 Hb_002255_050--Hb_022408_010 Hb_002221_050 Hb_002221_050 Hb_002255_050--Hb_002221_050 Hb_009627_010 Hb_009627_010 Hb_002255_050--Hb_009627_010 Hb_000645_120 Hb_000645_120 Hb_002255_050--Hb_000645_120 Hb_004228_010 Hb_004228_010 Hb_004306_080--Hb_004228_010 Hb_000785_040 Hb_000785_040 Hb_004306_080--Hb_000785_040 Hb_000116_500 Hb_000116_500 Hb_004306_080--Hb_000116_500 Hb_004102_140 Hb_004102_140 Hb_004306_080--Hb_004102_140 Hb_007062_020 Hb_007062_020 Hb_004306_080--Hb_007062_020 Hb_002493_020 Hb_002493_020 Hb_004306_080--Hb_002493_020 Hb_004627_060 Hb_004627_060 Hb_135611_010--Hb_004627_060 Hb_000516_040 Hb_000516_040 Hb_135611_010--Hb_000516_040 Hb_135611_010--Hb_000088_130 Hb_000072_150 Hb_000072_150 Hb_135611_010--Hb_000072_150 Hb_001900_120 Hb_001900_120 Hb_135611_010--Hb_001900_120 Hb_001247_070 Hb_001247_070 Hb_001930_010--Hb_001247_070 Hb_000390_070 Hb_000390_070 Hb_001930_010--Hb_000390_070 Hb_003216_080 Hb_003216_080 Hb_001930_010--Hb_003216_080 Hb_000313_060 Hb_000313_060 Hb_001930_010--Hb_000313_060 Hb_124315_020 Hb_124315_020 Hb_001930_010--Hb_124315_020 Hb_000514_060 Hb_000514_060 Hb_001930_010--Hb_000514_060 Hb_126643_010 Hb_126643_010 Hb_002255_070--Hb_126643_010 Hb_000627_080 Hb_000627_080 Hb_002255_070--Hb_000627_080 Hb_000005_380 Hb_000005_380 Hb_002255_070--Hb_000005_380 Hb_002255_070--Hb_000390_070 Hb_002255_070--Hb_001930_010 Hb_002255_070--Hb_000514_060 Hb_000088_130--Hb_004627_060 Hb_000375_130 Hb_000375_130 Hb_000088_130--Hb_000375_130 Hb_174821_010 Hb_174821_010 Hb_000088_130--Hb_174821_010 Hb_002107_070 Hb_002107_070 Hb_000088_130--Hb_002107_070 Hb_001454_280 Hb_001454_280 Hb_000088_130--Hb_001454_280 Hb_002301_080 Hb_002301_080 Hb_000088_130--Hb_002301_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.2195 14.5262 10.1887 15.5171 33.6552 23.0244
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.84565 8.28986 26.5788 18.725 13.4937

CAGE analysis