Hb_000398_190

Information

Type -
Description -
Location Contig398: 262003-272644
Sequence    

Annotation

kegg
ID rcu:RCOM_0824980
description amidase, putative (EC:3.5.1.4)
nr
ID XP_012069135.1
description PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
swissprot
ID F4KCL7
description Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana GN=OM64 PE=1 SV=1
trembl
ID A0A067KXG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24900 PE=4 SV=1
Gene Ontology
ID GO:0005737
description outer envelope protein mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39676: 262882-267685 , PASA_asmbl_39677: 267695-272715
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000398_190 0.0 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
2 Hb_002701_080 0.0647507258 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas]
3 Hb_001504_160 0.0733675128 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
4 Hb_012654_010 0.0788178746 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
5 Hb_011612_010 0.0813308684 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
6 Hb_000230_330 0.0883042218 - - PREDICTED: calcium-binding protein 39-like [Populus euphratica]
7 Hb_000041_220 0.0891294553 - - polyribonucleotide nucleotidyltransferase, putative [Ricinus communis]
8 Hb_000076_080 0.0926052271 - - PREDICTED: protein MOS2 [Jatropha curcas]
9 Hb_009620_040 0.0948417473 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
10 Hb_000107_100 0.096755587 - - hypothetical protein JCGZ_16208 [Jatropha curcas]
11 Hb_002341_030 0.0991184942 - - PREDICTED: transcription factor bHLH140 [Jatropha curcas]
12 Hb_002007_250 0.1026387455 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005214_160 0.1037167532 - - PREDICTED: heat shock 70 kDa protein, mitochondrial [Jatropha curcas]
14 Hb_003581_140 0.1059767075 - - PREDICTED: hypersensitive-induced response protein 1-like [Nelumbo nucifera]
15 Hb_004724_360 0.1074977113 - - OTU-like cysteine protease family protein [Populus trichocarpa]
16 Hb_000490_030 0.1075857716 - - DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
17 Hb_003506_080 0.1078549432 - - dipeptidyl peptidase IV, putative [Ricinus communis]
18 Hb_005635_010 0.1083740777 - - PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Jatropha curcas]
19 Hb_005730_030 0.1089414368 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
20 Hb_041091_010 0.1091734568 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000398_190 Hb_000398_190 Hb_002701_080 Hb_002701_080 Hb_000398_190--Hb_002701_080 Hb_001504_160 Hb_001504_160 Hb_000398_190--Hb_001504_160 Hb_012654_010 Hb_012654_010 Hb_000398_190--Hb_012654_010 Hb_011612_010 Hb_011612_010 Hb_000398_190--Hb_011612_010 Hb_000230_330 Hb_000230_330 Hb_000398_190--Hb_000230_330 Hb_000041_220 Hb_000041_220 Hb_000398_190--Hb_000041_220 Hb_002701_080--Hb_011612_010 Hb_002701_080--Hb_012654_010 Hb_002701_080--Hb_001504_160 Hb_009620_040 Hb_009620_040 Hb_002701_080--Hb_009620_040 Hb_002701_080--Hb_000230_330 Hb_000076_080 Hb_000076_080 Hb_001504_160--Hb_000076_080 Hb_001504_160--Hb_012654_010 Hb_001504_160--Hb_000230_330 Hb_004724_360 Hb_004724_360 Hb_001504_160--Hb_004724_360 Hb_000107_100 Hb_000107_100 Hb_001504_160--Hb_000107_100 Hb_003384_030 Hb_003384_030 Hb_001504_160--Hb_003384_030 Hb_012654_010--Hb_000107_100 Hb_000139_250 Hb_000139_250 Hb_012654_010--Hb_000139_250 Hb_001057_010 Hb_001057_010 Hb_012654_010--Hb_001057_010 Hb_005214_160 Hb_005214_160 Hb_012654_010--Hb_005214_160 Hb_011612_010--Hb_001504_160 Hb_011612_010--Hb_012654_010 Hb_012193_010 Hb_012193_010 Hb_011612_010--Hb_012193_010 Hb_004162_280 Hb_004162_280 Hb_011612_010--Hb_004162_280 Hb_001584_110 Hb_001584_110 Hb_000230_330--Hb_001584_110 Hb_000390_060 Hb_000390_060 Hb_000230_330--Hb_000390_060 Hb_000462_150 Hb_000462_150 Hb_000230_330--Hb_000462_150 Hb_003434_060 Hb_003434_060 Hb_000230_330--Hb_003434_060 Hb_000230_330--Hb_000076_080 Hb_006816_320 Hb_006816_320 Hb_000041_220--Hb_006816_320 Hb_002046_040 Hb_002046_040 Hb_000041_220--Hb_002046_040 Hb_000284_210 Hb_000284_210 Hb_000041_220--Hb_000284_210 Hb_000236_370 Hb_000236_370 Hb_000041_220--Hb_000236_370 Hb_000041_220--Hb_009620_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.5354 8.94663 3.88394 4.54089 27.4896 29.795
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.13799 11.5991 14.5258 12.1438 2.47252

CAGE analysis