Hb_026549_010

Information

Type -
Description -
Location Contig26549: 57-3768
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026549_010 0.0 - - -
2 Hb_002217_470 0.1474446142 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
3 Hb_000868_050 0.1695705565 - - RAD51 homolog [Populus nigra]
4 Hb_016734_080 0.1776548254 - - PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Jatropha curcas]
5 Hb_001054_020 0.1830010404 - - glutamine synthetase [Hevea brasiliensis]
6 Hb_000654_030 0.1840840769 - - -
7 Hb_000622_200 0.1885103805 - - aldose 1-epimerase, putative [Ricinus communis]
8 Hb_009620_100 0.1903845155 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
9 Hb_003001_090 0.1924704775 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
10 Hb_001140_270 0.1928414749 - - hypothetical protein EUGRSUZ_E00166 [Eucalyptus grandis]
11 Hb_034552_030 0.1937399482 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
12 Hb_000916_070 0.1946883985 - - PREDICTED: sister chromatid cohesion protein DCC1-like [Jatropha curcas]
13 Hb_000948_230 0.2014556409 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_052805_010 0.2016209239 - - hypothetical protein POPTR_0009s03650g [Populus trichocarpa]
15 Hb_014834_050 0.2022105996 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001124_070 0.202524681 - - Serine/threonine-protein kinase ULK4 [Gossypium arboreum]
17 Hb_003994_230 0.2037720781 - - 7-dehydrocholesterol reductase, putative [Ricinus communis]
18 Hb_000025_630 0.2040694552 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
19 Hb_011671_480 0.2041262895 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000720_040 0.206292102 - - PREDICTED: replication factor C subunit 2 [Jatropha curcas]

Gene co-expression network

sample Hb_026549_010 Hb_026549_010 Hb_002217_470 Hb_002217_470 Hb_026549_010--Hb_002217_470 Hb_000868_050 Hb_000868_050 Hb_026549_010--Hb_000868_050 Hb_016734_080 Hb_016734_080 Hb_026549_010--Hb_016734_080 Hb_001054_020 Hb_001054_020 Hb_026549_010--Hb_001054_020 Hb_000654_030 Hb_000654_030 Hb_026549_010--Hb_000654_030 Hb_000622_200 Hb_000622_200 Hb_026549_010--Hb_000622_200 Hb_002217_470--Hb_000654_030 Hb_000023_160 Hb_000023_160 Hb_002217_470--Hb_000023_160 Hb_000317_160 Hb_000317_160 Hb_002217_470--Hb_000317_160 Hb_002148_020 Hb_002148_020 Hb_002217_470--Hb_002148_020 Hb_034552_030 Hb_034552_030 Hb_002217_470--Hb_034552_030 Hb_000916_070 Hb_000916_070 Hb_000868_050--Hb_000916_070 Hb_003001_090 Hb_003001_090 Hb_000868_050--Hb_003001_090 Hb_090158_010 Hb_090158_010 Hb_000868_050--Hb_090158_010 Hb_002490_010 Hb_002490_010 Hb_000868_050--Hb_002490_010 Hb_004195_230 Hb_004195_230 Hb_000868_050--Hb_004195_230 Hb_001221_110 Hb_001221_110 Hb_016734_080--Hb_001221_110 Hb_000359_040 Hb_000359_040 Hb_016734_080--Hb_000359_040 Hb_001357_310 Hb_001357_310 Hb_016734_080--Hb_001357_310 Hb_010775_030 Hb_010775_030 Hb_016734_080--Hb_010775_030 Hb_004096_180 Hb_004096_180 Hb_016734_080--Hb_004096_180 Hb_002232_480 Hb_002232_480 Hb_016734_080--Hb_002232_480 Hb_003549_150 Hb_003549_150 Hb_001054_020--Hb_003549_150 Hb_000256_190 Hb_000256_190 Hb_001054_020--Hb_000256_190 Hb_004310_020 Hb_004310_020 Hb_001054_020--Hb_004310_020 Hb_000523_040 Hb_000523_040 Hb_001054_020--Hb_000523_040 Hb_158062_010 Hb_158062_010 Hb_001054_020--Hb_158062_010 Hb_135831_010 Hb_135831_010 Hb_001054_020--Hb_135831_010 Hb_000089_200 Hb_000089_200 Hb_000654_030--Hb_000089_200 Hb_000913_040 Hb_000913_040 Hb_000654_030--Hb_000913_040 Hb_000656_190 Hb_000656_190 Hb_000654_030--Hb_000656_190 Hb_001584_260 Hb_001584_260 Hb_000654_030--Hb_001584_260 Hb_000580_100 Hb_000580_100 Hb_000622_200--Hb_000580_100 Hb_010381_010 Hb_010381_010 Hb_000622_200--Hb_010381_010 Hb_001482_050 Hb_001482_050 Hb_000622_200--Hb_001482_050 Hb_007850_030 Hb_007850_030 Hb_000622_200--Hb_007850_030 Hb_000622_200--Hb_016734_080 Hb_039021_010 Hb_039021_010 Hb_000622_200--Hb_039021_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0580001 0.155775 0.314742 0.424198 0.277774 0.181833
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.200135 0.26228 0.189925 0.25471 0

CAGE analysis