Hb_018247_010

Information

Type -
Description -
Location Contig18247: 3436-4076
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP24664.1
description hypothetical protein JCGZ_26531 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYR1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26531 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018247_010 0.0 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
2 Hb_000932_080 0.2232614934 - - -
3 Hb_042404_010 0.2435988283 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
4 Hb_000173_480 0.2503115666 - - PREDICTED: calcium-binding protein 39 [Jatropha curcas]
5 Hb_070820_010 0.2510705837 - - hypothetical protein B456_008G232800 [Gossypium raimondii]
6 Hb_004204_090 0.2555552867 - - hypothetical protein JCGZ_11697 [Jatropha curcas]
7 Hb_009355_030 0.2613770613 - - conserved hypothetical protein [Ricinus communis]
8 Hb_027428_030 0.262889083 - - unnamed protein product [Coffea canephora]
9 Hb_004098_030 0.2631499041 - - TMV resistance protein N, putative [Ricinus communis]
10 Hb_000260_090 0.2653505066 - - PREDICTED: ubiquitin-conjugating enzyme E2 28 [Gossypium raimondii]
11 Hb_056196_070 0.2689779182 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
12 Hb_002626_040 0.2698669102 - - PREDICTED: inter-alpha-trypsin inhibitor heavy chain H3 isoform X1 [Jatropha curcas]
13 Hb_005565_030 0.2708297874 - - PREDICTED: uncharacterized protein LOC105633107 isoform X1 [Jatropha curcas]
14 Hb_114839_010 0.2720415915 - - -
15 Hb_002135_040 0.2729819699 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
16 Hb_001832_160 0.2776455224 - - conserved hypothetical protein [Ricinus communis]
17 Hb_156144_010 0.2847097897 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
18 Hb_002002_020 0.286046188 - - Phosphoprotein phosphatase isoform 3 [Theobroma cacao]
19 Hb_002821_010 0.2910836196 - - PREDICTED: nucleolar protein 16 [Jatropha curcas]
20 Hb_002141_020 0.2917870161 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]

Gene co-expression network

sample Hb_018247_010 Hb_018247_010 Hb_000932_080 Hb_000932_080 Hb_018247_010--Hb_000932_080 Hb_042404_010 Hb_042404_010 Hb_018247_010--Hb_042404_010 Hb_000173_480 Hb_000173_480 Hb_018247_010--Hb_000173_480 Hb_070820_010 Hb_070820_010 Hb_018247_010--Hb_070820_010 Hb_004204_090 Hb_004204_090 Hb_018247_010--Hb_004204_090 Hb_009355_030 Hb_009355_030 Hb_018247_010--Hb_009355_030 Hb_000243_020 Hb_000243_020 Hb_000932_080--Hb_000243_020 Hb_076038_010 Hb_076038_010 Hb_000932_080--Hb_076038_010 Hb_099046_010 Hb_099046_010 Hb_000932_080--Hb_099046_010 Hb_001493_010 Hb_001493_010 Hb_000932_080--Hb_001493_010 Hb_002205_100 Hb_002205_100 Hb_000932_080--Hb_002205_100 Hb_000445_330 Hb_000445_330 Hb_042404_010--Hb_000445_330 Hb_029982_010 Hb_029982_010 Hb_042404_010--Hb_029982_010 Hb_136765_010 Hb_136765_010 Hb_042404_010--Hb_136765_010 Hb_086859_010 Hb_086859_010 Hb_042404_010--Hb_086859_010 Hb_000331_500 Hb_000331_500 Hb_042404_010--Hb_000331_500 Hb_042404_010--Hb_070820_010 Hb_001541_270 Hb_001541_270 Hb_000173_480--Hb_001541_270 Hb_002626_040 Hb_002626_040 Hb_000173_480--Hb_002626_040 Hb_146464_010 Hb_146464_010 Hb_000173_480--Hb_146464_010 Hb_006316_070 Hb_006316_070 Hb_000173_480--Hb_006316_070 Hb_000798_060 Hb_000798_060 Hb_000173_480--Hb_000798_060 Hb_004032_270 Hb_004032_270 Hb_000173_480--Hb_004032_270 Hb_000086_330 Hb_000086_330 Hb_070820_010--Hb_000086_330 Hb_002821_010 Hb_002821_010 Hb_070820_010--Hb_002821_010 Hb_004098_030 Hb_004098_030 Hb_070820_010--Hb_004098_030 Hb_003398_060 Hb_003398_060 Hb_070820_010--Hb_003398_060 Hb_048197_010 Hb_048197_010 Hb_070820_010--Hb_048197_010 Hb_004204_090--Hb_042404_010 Hb_003018_110 Hb_003018_110 Hb_004204_090--Hb_003018_110 Hb_007778_020 Hb_007778_020 Hb_004204_090--Hb_007778_020 Hb_188209_010 Hb_188209_010 Hb_004204_090--Hb_188209_010 Hb_114839_010 Hb_114839_010 Hb_004204_090--Hb_114839_010 Hb_133311_010 Hb_133311_010 Hb_004204_090--Hb_133311_010 Hb_183510_010 Hb_183510_010 Hb_009355_030--Hb_183510_010 Hb_006588_090 Hb_006588_090 Hb_009355_030--Hb_006588_090 Hb_001247_230 Hb_001247_230 Hb_009355_030--Hb_001247_230 Hb_000174_200 Hb_000174_200 Hb_009355_030--Hb_000174_200 Hb_000116_570 Hb_000116_570 Hb_009355_030--Hb_000116_570 Hb_002002_020 Hb_002002_020 Hb_009355_030--Hb_002002_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.846087 1.15198 0 0.138965 0.549159 1.15953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.20396 0.315284 0 0 0

CAGE analysis