Hb_017491_070

Information

Type -
Description -
Location Contig17491: 45786-48492
Sequence    

Annotation

kegg
ID vvi:100251506
description dnaJ homolog subfamily B member 6-A
nr
ID XP_012068829.1
description PREDICTED: dnaJ homolog subfamily B member 6-like isoform X1 [Jatropha curcas]
swissprot
ID B9KAB9
description Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
trembl
ID A0A067KWX6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24656 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16661: 45816-46872 , PASA_asmbl_16662: 47837-48411
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017491_070 0.0 - - PREDICTED: dnaJ homolog subfamily B member 6-like isoform X1 [Jatropha curcas]
2 Hb_001433_020 0.1200955766 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
3 Hb_001301_130 0.151066355 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]
4 Hb_000735_100 0.1546408679 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
5 Hb_002896_060 0.1559717129 - - PREDICTED: synaptotagmin-2 [Jatropha curcas]
6 Hb_006618_040 0.163796363 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
7 Hb_000997_150 0.1661117099 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_002965_030 0.1665522441 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
9 Hb_001051_090 0.1698113147 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 11 [Jatropha curcas]
10 Hb_000173_150 0.1705148714 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]
11 Hb_000024_120 0.1751854844 - - PREDICTED: uncharacterized protein LOC105122546 isoform X1 [Populus euphratica]
12 Hb_000661_020 0.1752534292 - - BnaC08g27190D [Brassica napus]
13 Hb_001454_220 0.1763599493 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
14 Hb_006658_030 0.1769921396 - - hypothetical protein JCGZ_04047 [Jatropha curcas]
15 Hb_105641_010 0.1772935634 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
16 Hb_009558_040 0.177303668 transcription factor TF Family: MYB hypothetical protein PHAVU_008G102000g [Phaseolus vulgaris]
17 Hb_003026_030 0.1786121087 - - transformer serine/arginine-rich ribonucleoprotein [Populus trichocarpa]
18 Hb_001117_190 0.1791189564 transcription factor TF Family: FAR1 FAR1-related sequence 11 [Theobroma cacao]
19 Hb_000345_490 0.1792842796 - - PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]
20 Hb_000343_110 0.1794865431 - - Heat shock 70 kDa protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_017491_070 Hb_017491_070 Hb_001433_020 Hb_001433_020 Hb_017491_070--Hb_001433_020 Hb_001301_130 Hb_001301_130 Hb_017491_070--Hb_001301_130 Hb_000735_100 Hb_000735_100 Hb_017491_070--Hb_000735_100 Hb_002896_060 Hb_002896_060 Hb_017491_070--Hb_002896_060 Hb_006618_040 Hb_006618_040 Hb_017491_070--Hb_006618_040 Hb_000997_150 Hb_000997_150 Hb_017491_070--Hb_000997_150 Hb_000483_180 Hb_000483_180 Hb_001433_020--Hb_000483_180 Hb_009558_040 Hb_009558_040 Hb_001433_020--Hb_009558_040 Hb_002686_330 Hb_002686_330 Hb_001433_020--Hb_002686_330 Hb_001433_020--Hb_002896_060 Hb_035947_010 Hb_035947_010 Hb_001433_020--Hb_035947_010 Hb_000028_510 Hb_000028_510 Hb_001301_130--Hb_000028_510 Hb_028872_170 Hb_028872_170 Hb_001301_130--Hb_028872_170 Hb_001021_200 Hb_001021_200 Hb_001301_130--Hb_001021_200 Hb_009486_080 Hb_009486_080 Hb_001301_130--Hb_009486_080 Hb_000343_110 Hb_000343_110 Hb_001301_130--Hb_000343_110 Hb_003292_050 Hb_003292_050 Hb_001301_130--Hb_003292_050 Hb_028872_120 Hb_028872_120 Hb_000735_100--Hb_028872_120 Hb_000025_650 Hb_000025_650 Hb_000735_100--Hb_000025_650 Hb_002249_120 Hb_002249_120 Hb_000735_100--Hb_002249_120 Hb_005408_020 Hb_005408_020 Hb_000735_100--Hb_005408_020 Hb_000661_020 Hb_000661_020 Hb_000735_100--Hb_000661_020 Hb_000076_260 Hb_000076_260 Hb_000735_100--Hb_000076_260 Hb_001051_090 Hb_001051_090 Hb_002896_060--Hb_001051_090 Hb_027380_030 Hb_027380_030 Hb_002896_060--Hb_027380_030 Hb_002092_100 Hb_002092_100 Hb_002896_060--Hb_002092_100 Hb_000453_140 Hb_000453_140 Hb_002896_060--Hb_000453_140 Hb_001952_120 Hb_001952_120 Hb_002896_060--Hb_001952_120 Hb_002805_060 Hb_002805_060 Hb_002896_060--Hb_002805_060 Hb_001232_100 Hb_001232_100 Hb_006618_040--Hb_001232_100 Hb_000334_170 Hb_000334_170 Hb_006618_040--Hb_000334_170 Hb_006618_040--Hb_000343_110 Hb_000941_140 Hb_000941_140 Hb_006618_040--Hb_000941_140 Hb_002400_230 Hb_002400_230 Hb_006618_040--Hb_002400_230 Hb_004296_010 Hb_004296_010 Hb_006618_040--Hb_004296_010 Hb_000732_070 Hb_000732_070 Hb_000997_150--Hb_000732_070 Hb_001454_220 Hb_001454_220 Hb_000997_150--Hb_001454_220 Hb_001269_310 Hb_001269_310 Hb_000997_150--Hb_001269_310 Hb_000997_150--Hb_002400_230 Hb_044155_010 Hb_044155_010 Hb_000997_150--Hb_044155_010 Hb_000185_150 Hb_000185_150 Hb_000997_150--Hb_000185_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.1947 58.9094 51.5304 13.0511 96.1962 32.4665
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7331 3.09115 21.3559 10.0592 29.1097

CAGE analysis