Hb_015234_010

Information

Type -
Description -
Location Contig15234: 16169-18285
Sequence    

Annotation

kegg
ID rcu:RCOM_0595350
description Protein KES1, putative
nr
ID XP_012084542.1
description PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
swissprot
ID Q9LVD4
description Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana GN=ORP4C PE=2 SV=1
trembl
ID A0A067JU81
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19813 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015234_010 0.0 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
2 Hb_008226_010 0.1078116111 - - PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
3 Hb_001276_050 0.127541436 desease resistance Gene Name: NB-ARC NBS-LRR resistance-like protein 1O [Medicago truncatula]
4 Hb_001295_080 0.1281535867 - - Protein KES1, putative [Ricinus communis]
5 Hb_080048_030 0.1378496805 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
6 Hb_001085_200 0.1486958384 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 15 [Jatropha curcas]
7 Hb_189208_080 0.1510243078 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 11-like isoform X1 [Jatropha curcas]
8 Hb_001146_030 0.1517955441 - - cytochrome P450, putative [Ricinus communis]
9 Hb_011214_080 0.1531090033 - - sucrose synthase 1 [Hevea brasiliensis]
10 Hb_000920_340 0.1561121502 - - o-methyltransferase, putative [Ricinus communis]
11 Hb_001104_070 0.1566281849 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]
12 Hb_002338_040 0.1576200317 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007595_020 0.1580063072 - - maturase K [Hevea brasiliensis]
14 Hb_000134_080 0.1602752354 - - synaptotagmin, putative [Ricinus communis]
15 Hb_018202_040 0.1625908489 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
16 Hb_001488_160 0.1634475051 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
17 Hb_000029_380 0.1637061585 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002044_070 0.1638203802 - - Chlorophyll a-b binding protein 3, chloroplastic [Theobroma cacao]
19 Hb_018487_040 0.1644260309 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
20 Hb_000367_220 0.1647826192 - - hypothetical protein RCOM_1470580 [Ricinus communis]

Gene co-expression network

sample Hb_015234_010 Hb_015234_010 Hb_008226_010 Hb_008226_010 Hb_015234_010--Hb_008226_010 Hb_001276_050 Hb_001276_050 Hb_015234_010--Hb_001276_050 Hb_001295_080 Hb_001295_080 Hb_015234_010--Hb_001295_080 Hb_080048_030 Hb_080048_030 Hb_015234_010--Hb_080048_030 Hb_001085_200 Hb_001085_200 Hb_015234_010--Hb_001085_200 Hb_189208_080 Hb_189208_080 Hb_015234_010--Hb_189208_080 Hb_000134_080 Hb_000134_080 Hb_008226_010--Hb_000134_080 Hb_000139_060 Hb_000139_060 Hb_008226_010--Hb_000139_060 Hb_002338_040 Hb_002338_040 Hb_008226_010--Hb_002338_040 Hb_000260_520 Hb_000260_520 Hb_008226_010--Hb_000260_520 Hb_005066_040 Hb_005066_040 Hb_008226_010--Hb_005066_040 Hb_001276_050--Hb_008226_010 Hb_000270_340 Hb_000270_340 Hb_001276_050--Hb_000270_340 Hb_008695_060 Hb_008695_060 Hb_001276_050--Hb_008695_060 Hb_003038_070 Hb_003038_070 Hb_001276_050--Hb_003038_070 Hb_001097_030 Hb_001097_030 Hb_001276_050--Hb_001097_030 Hb_001146_030 Hb_001146_030 Hb_001295_080--Hb_001146_030 Hb_002620_040 Hb_002620_040 Hb_001295_080--Hb_002620_040 Hb_000139_030 Hb_000139_030 Hb_001295_080--Hb_000139_030 Hb_010021_040 Hb_010021_040 Hb_001295_080--Hb_010021_040 Hb_057880_020 Hb_057880_020 Hb_001295_080--Hb_057880_020 Hb_000462_160 Hb_000462_160 Hb_001295_080--Hb_000462_160 Hb_001104_070 Hb_001104_070 Hb_080048_030--Hb_001104_070 Hb_018487_040 Hb_018487_040 Hb_080048_030--Hb_018487_040 Hb_169492_010 Hb_169492_010 Hb_080048_030--Hb_169492_010 Hb_005675_030 Hb_005675_030 Hb_080048_030--Hb_005675_030 Hb_002675_220 Hb_002675_220 Hb_080048_030--Hb_002675_220 Hb_080048_030--Hb_189208_080 Hb_003253_030 Hb_003253_030 Hb_001085_200--Hb_003253_030 Hb_068804_110 Hb_068804_110 Hb_001085_200--Hb_068804_110 Hb_001085_200--Hb_001146_030 Hb_003622_050 Hb_003622_050 Hb_001085_200--Hb_003622_050 Hb_002188_150 Hb_002188_150 Hb_001085_200--Hb_002188_150 Hb_054865_040 Hb_054865_040 Hb_001085_200--Hb_054865_040 Hb_189208_080--Hb_001104_070 Hb_000920_340 Hb_000920_340 Hb_189208_080--Hb_000920_340 Hb_189208_080--Hb_002675_220 Hb_140595_030 Hb_140595_030 Hb_189208_080--Hb_140595_030 Hb_011214_080 Hb_011214_080 Hb_189208_080--Hb_011214_080 Hb_189208_080--Hb_000260_520
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.536975 2.06222 3.76849 11.8139 0 1.98412
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0923928 0.159005 0.419587 40.0589

CAGE analysis