Hb_010666_010

Information

Type -
Description -
Location Contig10666: 4957-17066
Sequence    

Annotation

kegg
ID rcu:RCOM_1205050
description hypothetical protein
nr
ID XP_002530310.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SWE1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1205050 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010666_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000077_380 0.1239800588 - - PREDICTED: protochlorophyllide reductase [Jatropha curcas]
3 Hb_011214_130 0.1251865078 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
4 Hb_000161_010 0.127917854 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
5 Hb_026437_020 0.1317159576 - - ring finger protein, putative [Ricinus communis]
6 Hb_001564_120 0.1411286319 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Populus euphratica]
7 Hb_002235_070 0.1416080239 - - PREDICTED: uncharacterized protein LOC105644108 [Jatropha curcas]
8 Hb_000101_330 0.1426123099 - - -
9 Hb_033363_040 0.1426348472 - - PREDICTED: probable galacturonosyltransferase-like 3 [Jatropha curcas]
10 Hb_005063_030 0.144554212 - - Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis]
11 Hb_119600_030 0.1453993193 - - PREDICTED: uncharacterized protein LOC105635187 [Jatropha curcas]
12 Hb_003549_170 0.1454196143 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jatropha curcas]
13 Hb_153258_040 0.1464159872 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
14 Hb_003025_160 0.1464200816 - - Protein HVA22, putative [Ricinus communis]
15 Hb_002852_010 0.1477223224 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
16 Hb_001699_140 0.1479276329 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
17 Hb_087599_010 0.1492156479 - - PREDICTED: tropinone reductase homolog [Solanum tuberosum]
18 Hb_000482_180 0.1504788408 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
19 Hb_001604_100 0.1505621687 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
20 Hb_001975_100 0.1507534959 - - chlorophyll a-b binding protein 151, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_010666_010 Hb_010666_010 Hb_000077_380 Hb_000077_380 Hb_010666_010--Hb_000077_380 Hb_011214_130 Hb_011214_130 Hb_010666_010--Hb_011214_130 Hb_000161_010 Hb_000161_010 Hb_010666_010--Hb_000161_010 Hb_026437_020 Hb_026437_020 Hb_010666_010--Hb_026437_020 Hb_001564_120 Hb_001564_120 Hb_010666_010--Hb_001564_120 Hb_002235_070 Hb_002235_070 Hb_010666_010--Hb_002235_070 Hb_005063_030 Hb_005063_030 Hb_000077_380--Hb_005063_030 Hb_000101_330 Hb_000101_330 Hb_000077_380--Hb_000101_330 Hb_006570_030 Hb_006570_030 Hb_000077_380--Hb_006570_030 Hb_001975_100 Hb_001975_100 Hb_000077_380--Hb_001975_100 Hb_000077_380--Hb_001564_120 Hb_002852_010 Hb_002852_010 Hb_000077_380--Hb_002852_010 Hb_004970_060 Hb_004970_060 Hb_011214_130--Hb_004970_060 Hb_001946_120 Hb_001946_120 Hb_011214_130--Hb_001946_120 Hb_153258_040 Hb_153258_040 Hb_011214_130--Hb_153258_040 Hb_000984_160 Hb_000984_160 Hb_011214_130--Hb_000984_160 Hb_003025_160 Hb_003025_160 Hb_011214_130--Hb_003025_160 Hb_033363_040 Hb_033363_040 Hb_011214_130--Hb_033363_040 Hb_000161_010--Hb_000077_380 Hb_005977_040 Hb_005977_040 Hb_000161_010--Hb_005977_040 Hb_000161_010--Hb_000101_330 Hb_002609_140 Hb_002609_140 Hb_000161_010--Hb_002609_140 Hb_001584_210 Hb_001584_210 Hb_000161_010--Hb_001584_210 Hb_007477_060 Hb_007477_060 Hb_000161_010--Hb_007477_060 Hb_002762_050 Hb_002762_050 Hb_026437_020--Hb_002762_050 Hb_000694_080 Hb_000694_080 Hb_026437_020--Hb_000694_080 Hb_087599_010 Hb_087599_010 Hb_026437_020--Hb_087599_010 Hb_000017_210 Hb_000017_210 Hb_026437_020--Hb_000017_210 Hb_000185_010 Hb_000185_010 Hb_026437_020--Hb_000185_010 Hb_000026_060 Hb_000026_060 Hb_026437_020--Hb_000026_060 Hb_001564_120--Hb_005063_030 Hb_000098_040 Hb_000098_040 Hb_001564_120--Hb_000098_040 Hb_001999_230 Hb_001999_230 Hb_001564_120--Hb_001999_230 Hb_001564_120--Hb_001975_100 Hb_000099_120 Hb_000099_120 Hb_001564_120--Hb_000099_120 Hb_001007_070 Hb_001007_070 Hb_001564_120--Hb_001007_070 Hb_000950_020 Hb_000950_020 Hb_002235_070--Hb_000950_020 Hb_000190_230 Hb_000190_230 Hb_002235_070--Hb_000190_230 Hb_003602_100 Hb_003602_100 Hb_002235_070--Hb_003602_100 Hb_007803_040 Hb_007803_040 Hb_002235_070--Hb_007803_040 Hb_000049_100 Hb_000049_100 Hb_002235_070--Hb_000049_100 Hb_006970_030 Hb_006970_030 Hb_002235_070--Hb_006970_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0523238 0.343275 0.182193 0.048737 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0189351 0.760159

CAGE analysis