Hb_011214_130

Information

Type transcription factor
Description TF Family: NAC
Location Contig11214: 102057-105990
Sequence    

Annotation

kegg
ID rcu:RCOM_1603380
description hypothetical protein
nr
ID XP_012074769.1
description PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
swissprot
ID Q9FFI5
description NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1
trembl
ID R4N7Q4
description NAC transcription factor 047 OS=Jatropha curcas GN=JCGZ_10487 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 86

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011214_130 0.0 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
2 Hb_004970_060 0.0699400152 - - PREDICTED: uncharacterized protein LOC100259061 [Vitis vinifera]
3 Hb_001946_120 0.0772908286 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
4 Hb_153258_040 0.0802090651 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
5 Hb_000984_160 0.0804685488 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
6 Hb_003025_160 0.0814950123 - - Protein HVA22, putative [Ricinus communis]
7 Hb_033363_040 0.0818102714 - - PREDICTED: probable galacturonosyltransferase-like 3 [Jatropha curcas]
8 Hb_005111_040 0.0848861052 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
9 Hb_005694_120 0.0865772766 - - PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type [Jatropha curcas]
10 Hb_044478_010 0.0876270988 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
11 Hb_005569_010 0.0918652746 - - Heme-binding protein, putative [Ricinus communis]
12 Hb_001999_230 0.0967331294 - - PREDICTED: uncharacterized protein LOC105630678 [Jatropha curcas]
13 Hb_131466_010 0.0973943806 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
14 Hb_012389_010 0.0999124502 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
15 Hb_000369_110 0.1007053245 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_006970_030 0.1011750623 - - synaptotagmin, putative [Ricinus communis]
17 Hb_001007_070 0.1012399809 - - thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
18 Hb_004835_020 0.1027876226 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
19 Hb_004052_030 0.1027992024 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
20 Hb_008225_050 0.1042194446 - - hypothetical protein PRUPE_ppa004332mg [Prunus persica]

Gene co-expression network

sample Hb_011214_130 Hb_011214_130 Hb_004970_060 Hb_004970_060 Hb_011214_130--Hb_004970_060 Hb_001946_120 Hb_001946_120 Hb_011214_130--Hb_001946_120 Hb_153258_040 Hb_153258_040 Hb_011214_130--Hb_153258_040 Hb_000984_160 Hb_000984_160 Hb_011214_130--Hb_000984_160 Hb_003025_160 Hb_003025_160 Hb_011214_130--Hb_003025_160 Hb_033363_040 Hb_033363_040 Hb_011214_130--Hb_033363_040 Hb_004970_060--Hb_003025_160 Hb_008225_050 Hb_008225_050 Hb_004970_060--Hb_008225_050 Hb_007537_040 Hb_007537_040 Hb_004970_060--Hb_007537_040 Hb_000254_130 Hb_000254_130 Hb_004970_060--Hb_000254_130 Hb_001999_230 Hb_001999_230 Hb_004970_060--Hb_001999_230 Hb_004970_060--Hb_153258_040 Hb_005694_120 Hb_005694_120 Hb_001946_120--Hb_005694_120 Hb_001946_120--Hb_153258_040 Hb_001007_070 Hb_001007_070 Hb_001946_120--Hb_001007_070 Hb_044478_010 Hb_044478_010 Hb_001946_120--Hb_044478_010 Hb_001946_120--Hb_000984_160 Hb_000099_120 Hb_000099_120 Hb_001946_120--Hb_000099_120 Hb_153258_040--Hb_044478_010 Hb_003777_080 Hb_003777_080 Hb_153258_040--Hb_003777_080 Hb_153258_040--Hb_001999_230 Hb_006970_030 Hb_006970_030 Hb_153258_040--Hb_006970_030 Hb_005569_010 Hb_005569_010 Hb_000984_160--Hb_005569_010 Hb_131876_010 Hb_131876_010 Hb_000984_160--Hb_131876_010 Hb_004052_030 Hb_004052_030 Hb_000984_160--Hb_004052_030 Hb_069696_020 Hb_069696_020 Hb_000984_160--Hb_069696_020 Hb_000847_030 Hb_000847_030 Hb_000984_160--Hb_000847_030 Hb_003025_160--Hb_008225_050 Hb_003025_160--Hb_000254_130 Hb_002259_090 Hb_002259_090 Hb_003025_160--Hb_002259_090 Hb_003025_160--Hb_007537_040 Hb_003025_160--Hb_001999_230 Hb_018591_020 Hb_018591_020 Hb_033363_040--Hb_018591_020 Hb_002007_220 Hb_002007_220 Hb_033363_040--Hb_002007_220 Hb_033363_040--Hb_003025_160 Hb_033363_040--Hb_004970_060 Hb_033363_040--Hb_002259_090 Hb_003494_090 Hb_003494_090 Hb_033363_040--Hb_003494_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.197428 1.56416 1.22506 0.03765 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.172753 3.08573

CAGE analysis