Hb_008145_010

Information

Type -
Description -
Location Contig8145: 7-1393
Sequence    

Annotation

kegg
ID pop:POPTR_0017s01950g
description hypothetical protein
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID Q7XBQ9
description Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008145_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_149515_010 0.1457134953 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
3 Hb_004800_220 0.1553607155 - - PREDICTED: random slug protein 5 [Jatropha curcas]
4 Hb_000453_130 0.169118754 - - PREDICTED: protein kinase 2A, chloroplastic-like [Jatropha curcas]
5 Hb_000649_180 0.1944602613 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
6 Hb_007919_040 0.1956377082 - - PREDICTED: protein LYK5 [Jatropha curcas]
7 Hb_000527_070 0.2016167219 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
8 Hb_000265_080 0.2018505487 - - Vacuolar cation/proton exchanger, putative [Ricinus communis]
9 Hb_002291_020 0.2024232949 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
10 Hb_000847_020 0.2035885877 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
11 Hb_011200_020 0.2037775756 - - aldo-keto reductase, putative [Ricinus communis]
12 Hb_029584_090 0.2052180786 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
13 Hb_004631_080 0.2079724821 - - P3B-ATPase PH1 [Petunia x hybrida]
14 Hb_004495_020 0.2089930054 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
15 Hb_002498_040 0.2154741711 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
16 Hb_008749_090 0.2155061218 - - hypothetical protein CICLE_v10017161mg [Citrus clementina]
17 Hb_006538_010 0.2160029172 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
18 Hb_004657_040 0.216199002 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
19 Hb_000098_310 0.2166644112 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
20 Hb_001014_150 0.2168964901 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_008145_010 Hb_008145_010 Hb_149515_010 Hb_149515_010 Hb_008145_010--Hb_149515_010 Hb_004800_220 Hb_004800_220 Hb_008145_010--Hb_004800_220 Hb_000453_130 Hb_000453_130 Hb_008145_010--Hb_000453_130 Hb_000649_180 Hb_000649_180 Hb_008145_010--Hb_000649_180 Hb_007919_040 Hb_007919_040 Hb_008145_010--Hb_007919_040 Hb_000527_070 Hb_000527_070 Hb_008145_010--Hb_000527_070 Hb_011909_010 Hb_011909_010 Hb_149515_010--Hb_011909_010 Hb_149515_010--Hb_000649_180 Hb_002291_020 Hb_002291_020 Hb_149515_010--Hb_002291_020 Hb_149515_010--Hb_007919_040 Hb_000141_010 Hb_000141_010 Hb_149515_010--Hb_000141_010 Hb_002200_060 Hb_002200_060 Hb_004800_220--Hb_002200_060 Hb_000265_080 Hb_000265_080 Hb_004800_220--Hb_000265_080 Hb_008097_020 Hb_008097_020 Hb_004800_220--Hb_008097_020 Hb_025526_080 Hb_025526_080 Hb_004800_220--Hb_025526_080 Hb_012753_190 Hb_012753_190 Hb_004800_220--Hb_012753_190 Hb_001014_150 Hb_001014_150 Hb_000453_130--Hb_001014_150 Hb_000847_020 Hb_000847_020 Hb_000453_130--Hb_000847_020 Hb_006538_010 Hb_006538_010 Hb_000453_130--Hb_006538_010 Hb_000453_130--Hb_004800_220 Hb_000445_030 Hb_000445_030 Hb_000453_130--Hb_000445_030 Hb_000649_180--Hb_002291_020 Hb_002527_050 Hb_002527_050 Hb_000649_180--Hb_002527_050 Hb_008033_060 Hb_008033_060 Hb_000649_180--Hb_008033_060 Hb_000649_180--Hb_000453_130 Hb_001754_260 Hb_001754_260 Hb_000649_180--Hb_001754_260 Hb_003576_050 Hb_003576_050 Hb_007919_040--Hb_003576_050 Hb_000853_060 Hb_000853_060 Hb_007919_040--Hb_000853_060 Hb_003517_020 Hb_003517_020 Hb_007919_040--Hb_003517_020 Hb_000928_040 Hb_000928_040 Hb_007919_040--Hb_000928_040 Hb_000367_310 Hb_000367_310 Hb_007919_040--Hb_000367_310 Hb_007919_040--Hb_002291_020 Hb_000527_070--Hb_000141_010 Hb_000527_140 Hb_000527_140 Hb_000527_070--Hb_000527_140 Hb_114684_010 Hb_114684_010 Hb_000527_070--Hb_114684_010 Hb_000527_070--Hb_000847_020 Hb_000345_340 Hb_000345_340 Hb_000527_070--Hb_000345_340 Hb_073973_020 Hb_073973_020 Hb_000527_070--Hb_073973_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0350082 0.913607 0.568451 0.25157 0.0350964 0.0183071
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0799452 0.0628867 0.468241 2.04006 0.390711

CAGE analysis