Hb_007403_070

Information

Type -
Description -
Location Contig7403: 58023-60702
Sequence    

Annotation

kegg
ID rcu:RCOM_0516380
description hypothetical protein
nr
ID KDP42732.1
description hypothetical protein JCGZ_23672 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2W9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23672 PE=4 SV=1
Gene Ontology
ID GO:0005634
description hypothetical protein JCGZ_23672

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007403_070 0.0 - - hypothetical protein JCGZ_23672 [Jatropha curcas]
2 Hb_001377_430 0.239204362 - - PREDICTED: laccase-6 [Jatropha curcas]
3 Hb_000162_270 0.2523420406 - - PREDICTED: uncharacterized protein LOC104442671 [Eucalyptus grandis]
4 Hb_006405_030 0.2528912137 - - hypothetical protein VITISV_043238 [Vitis vinifera]
5 Hb_001621_120 0.2940583831 - - Zeamatin precursor, putative [Ricinus communis]
6 Hb_000100_060 0.3027490122 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Populus euphratica]
7 Hb_000359_300 0.3114324568 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Zea mays]
8 Hb_011287_040 0.3177150759 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
9 Hb_009692_010 0.3253855639 - - -
10 Hb_007810_090 0.3257671969 - - actin actin-like protein [Coniophora puteana RWD-64-598 SS2]
11 Hb_007632_100 0.3264883266 transcription factor TF Family: NF-YB ccaat-binding transcription factor subunit A, putative [Ricinus communis]
12 Hb_000566_080 0.329048191 - - -
13 Hb_035436_010 0.3300644781 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Populus euphratica]
14 Hb_009748_010 0.3302729604 - - PREDICTED: endoglucanase 6 [Jatropha curcas]
15 Hb_005539_370 0.3307615239 - - ring finger protein, putative [Ricinus communis]
16 Hb_000281_060 0.3322154001 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
17 Hb_000544_030 0.3350058821 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000174_050 0.3366161877 - - PREDICTED: gamma-tubulin complex component 2 [Populus euphratica]
19 Hb_009620_090 0.3382343292 - - hypothetical protein L484_000980 [Morus notabilis]
20 Hb_000816_190 0.3408146218 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007403_070 Hb_007403_070 Hb_001377_430 Hb_001377_430 Hb_007403_070--Hb_001377_430 Hb_000162_270 Hb_000162_270 Hb_007403_070--Hb_000162_270 Hb_006405_030 Hb_006405_030 Hb_007403_070--Hb_006405_030 Hb_001621_120 Hb_001621_120 Hb_007403_070--Hb_001621_120 Hb_000100_060 Hb_000100_060 Hb_007403_070--Hb_000100_060 Hb_000359_300 Hb_000359_300 Hb_007403_070--Hb_000359_300 Hb_005539_370 Hb_005539_370 Hb_001377_430--Hb_005539_370 Hb_001377_430--Hb_001621_120 Hb_007810_090 Hb_007810_090 Hb_001377_430--Hb_007810_090 Hb_009748_010 Hb_009748_010 Hb_001377_430--Hb_009748_010 Hb_105959_010 Hb_105959_010 Hb_001377_430--Hb_105959_010 Hb_001377_430--Hb_000100_060 Hb_179286_010 Hb_179286_010 Hb_000162_270--Hb_179286_010 Hb_004218_100 Hb_004218_100 Hb_000162_270--Hb_004218_100 Hb_000162_270--Hb_001621_120 Hb_005843_020 Hb_005843_020 Hb_000162_270--Hb_005843_020 Hb_000162_270--Hb_000359_300 Hb_007632_100 Hb_007632_100 Hb_006405_030--Hb_007632_100 Hb_000889_100 Hb_000889_100 Hb_006405_030--Hb_000889_100 Hb_002960_150 Hb_002960_150 Hb_006405_030--Hb_002960_150 Hb_003605_040 Hb_003605_040 Hb_006405_030--Hb_003605_040 Hb_000742_160 Hb_000742_160 Hb_006405_030--Hb_000742_160 Hb_008119_030 Hb_008119_030 Hb_006405_030--Hb_008119_030 Hb_001621_120--Hb_000100_060 Hb_003893_060 Hb_003893_060 Hb_001621_120--Hb_003893_060 Hb_003376_370 Hb_003376_370 Hb_001621_120--Hb_003376_370 Hb_000977_200 Hb_000977_200 Hb_001621_120--Hb_000977_200 Hb_000816_190 Hb_000816_190 Hb_001621_120--Hb_000816_190 Hb_000100_060--Hb_000816_190 Hb_000100_060--Hb_007810_090 Hb_002164_010 Hb_002164_010 Hb_000100_060--Hb_002164_010 Hb_000311_040 Hb_000311_040 Hb_000100_060--Hb_000311_040 Hb_001367_010 Hb_001367_010 Hb_000359_300--Hb_001367_010 Hb_000979_010 Hb_000979_010 Hb_000359_300--Hb_000979_010 Hb_010883_140 Hb_010883_140 Hb_000359_300--Hb_010883_140 Hb_002570_010 Hb_002570_010 Hb_000359_300--Hb_002570_010 Hb_000139_110 Hb_000139_110 Hb_000359_300--Hb_000139_110 Hb_054541_010 Hb_054541_010 Hb_000359_300--Hb_054541_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.219457 0 0.537968 1.12283 0.073943 0.355625
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.172644 0 0.221935 0 0

CAGE analysis