Hb_005976_070

Information

Type -
Description -
Location Contig5976: 61609-63863
Sequence    

Annotation

kegg
ID rcu:RCOM_1408490
description triacylglycerol lipase, putative
nr
ID XP_002523593.1
description triacylglycerol lipase, putative [Ricinus communis]
swissprot
ID Q8RZ40
description Phospholipase A1-II 3 OS=Oryza sativa subsp. japonica GN=Os01g0651800 PE=2 SV=1
trembl
ID B9SC74
description Triacylglycerol acidic lipase TAL2 OS=Ricinus communis GN=TAL2 PE=2 SV=1
Gene Ontology
ID GO:0006629
description alpha beta-hydrolases superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50412: 63188-63924
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005976_070 0.0 - - triacylglycerol lipase, putative [Ricinus communis]
2 Hb_011649_010 0.1530706742 transcription factor TF Family: Pseudo ARR-B sensory transduction histidine kinase, putative [Ricinus communis]
3 Hb_000590_110 0.1591300393 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000539_040 0.1611933911 - - PREDICTED: uncharacterized protein LOC105636110 isoform X1 [Jatropha curcas]
5 Hb_002003_130 0.1748845607 - - hypothetical protein CISIN_1g027843mg [Citrus sinensis]
6 Hb_006472_040 0.1799389451 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
7 Hb_003602_100 0.1800414282 - - Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus communis]
8 Hb_000023_270 0.1828237969 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000190_230 0.183295003 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
10 Hb_003861_150 0.1833314403 - - hypothetical protein JCGZ_15167 [Jatropha curcas]
11 Hb_001682_020 0.1840821758 - - PREDICTED: uncharacterized protein LOC105628366 [Jatropha curcas]
12 Hb_010666_010 0.1843723973 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000369_110 0.1847009623 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_147028_010 0.185877495 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Prunus mume]
15 Hb_000327_260 0.1859860424 - - conserved hypothetical protein [Ricinus communis]
16 Hb_019654_180 0.1865407157 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
17 Hb_008112_020 0.1868165088 - - PREDICTED: magnesium transporter MRS2-11, chloroplastic [Jatropha curcas]
18 Hb_002235_070 0.1873850048 - - PREDICTED: uncharacterized protein LOC105644108 [Jatropha curcas]
19 Hb_086300_010 0.1887578584 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_000317_180 0.1900731699 - - PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_005976_070 Hb_005976_070 Hb_011649_010 Hb_011649_010 Hb_005976_070--Hb_011649_010 Hb_000590_110 Hb_000590_110 Hb_005976_070--Hb_000590_110 Hb_000539_040 Hb_000539_040 Hb_005976_070--Hb_000539_040 Hb_002003_130 Hb_002003_130 Hb_005976_070--Hb_002003_130 Hb_006472_040 Hb_006472_040 Hb_005976_070--Hb_006472_040 Hb_003602_100 Hb_003602_100 Hb_005976_070--Hb_003602_100 Hb_000118_090 Hb_000118_090 Hb_011649_010--Hb_000118_090 Hb_010721_020 Hb_010721_020 Hb_011649_010--Hb_010721_020 Hb_000317_180 Hb_000317_180 Hb_011649_010--Hb_000317_180 Hb_000193_220 Hb_000193_220 Hb_011649_010--Hb_000193_220 Hb_071079_020 Hb_071079_020 Hb_011649_010--Hb_071079_020 Hb_000045_050 Hb_000045_050 Hb_011649_010--Hb_000045_050 Hb_000139_360 Hb_000139_360 Hb_000590_110--Hb_000139_360 Hb_002042_210 Hb_002042_210 Hb_000590_110--Hb_002042_210 Hb_044478_010 Hb_044478_010 Hb_000590_110--Hb_044478_010 Hb_000049_100 Hb_000049_100 Hb_000590_110--Hb_000049_100 Hb_000369_110 Hb_000369_110 Hb_000590_110--Hb_000369_110 Hb_008195_090 Hb_008195_090 Hb_000590_110--Hb_008195_090 Hb_000327_260 Hb_000327_260 Hb_000539_040--Hb_000327_260 Hb_000116_220 Hb_000116_220 Hb_000539_040--Hb_000116_220 Hb_009838_070 Hb_009838_070 Hb_000539_040--Hb_009838_070 Hb_000711_030 Hb_000711_030 Hb_000539_040--Hb_000711_030 Hb_000832_270 Hb_000832_270 Hb_000539_040--Hb_000832_270 Hb_137222_010 Hb_137222_010 Hb_000539_040--Hb_137222_010 Hb_004128_170 Hb_004128_170 Hb_002003_130--Hb_004128_170 Hb_001584_210 Hb_001584_210 Hb_002003_130--Hb_001584_210 Hb_007044_270 Hb_007044_270 Hb_002003_130--Hb_007044_270 Hb_000077_380 Hb_000077_380 Hb_002003_130--Hb_000077_380 Hb_005063_060 Hb_005063_060 Hb_002003_130--Hb_005063_060 Hb_000098_040 Hb_000098_040 Hb_002003_130--Hb_000098_040 Hb_008112_020 Hb_008112_020 Hb_006472_040--Hb_008112_020 Hb_001195_290 Hb_001195_290 Hb_006472_040--Hb_001195_290 Hb_000679_320 Hb_000679_320 Hb_006472_040--Hb_000679_320 Hb_169383_010 Hb_169383_010 Hb_006472_040--Hb_169383_010 Hb_006472_040--Hb_000317_180 Hb_009393_140 Hb_009393_140 Hb_006472_040--Hb_009393_140 Hb_002249_090 Hb_002249_090 Hb_003602_100--Hb_002249_090 Hb_003602_100--Hb_001195_290 Hb_003120_020 Hb_003120_020 Hb_003602_100--Hb_003120_020 Hb_010326_020 Hb_010326_020 Hb_003602_100--Hb_010326_020 Hb_003602_100--Hb_000049_100 Hb_007803_040 Hb_007803_040 Hb_003602_100--Hb_007803_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.112012 1.51593 1.22891 0.219585 0.169329
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.139305 0.0394725 2.99888

CAGE analysis