Hb_002888_050

Information

Type -
Description -
Location Contig2888: 40384-42913
Sequence    

Annotation

kegg
ID cic:CICLE_v10018750mg
description hypothetical protein
nr
ID XP_012077089.1
description PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
swissprot
ID Q8W5R2
description Phospholipase SGR2 OS=Arabidopsis thaliana GN=SGR2 PE=1 SV=1
trembl
ID A0A067LMH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17221 PE=4 SV=1
Gene Ontology
ID GO:0009506
description phospholipase sgr2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002888_050 0.0 - - PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
2 Hb_002814_050 0.1389482554 - - PREDICTED: sugar carrier protein A [Jatropha curcas]
3 Hb_006355_070 0.1410627892 transcription factor TF Family: bHLH Phytochrome-interacting factor, putative [Ricinus communis]
4 Hb_002308_060 0.1487678988 - - PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
5 Hb_001737_040 0.150986389 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
6 Hb_004307_070 0.1549978569 - - kinase, putative [Ricinus communis]
7 Hb_003992_220 0.1566283435 - - s-receptor kinase, putative [Ricinus communis]
8 Hb_060198_010 0.1637995864 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
9 Hb_001607_070 0.1651213564 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
10 Hb_000465_450 0.1652077837 - - triacylglycerol lipase, putative [Ricinus communis]
11 Hb_001778_040 0.1681979834 - - hypothetical protein VITISV_021035 [Vitis vinifera]
12 Hb_001971_050 0.1687894096 - - WD-repeat protein, putative [Ricinus communis]
13 Hb_038833_010 0.1695584147 - - polyprotein [Ananas comosus]
14 Hb_003092_050 0.1707369537 - - PREDICTED: putative chloride channel-like protein CLC-g [Jatropha curcas]
15 Hb_000714_120 0.1737707563 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
16 Hb_001143_140 0.1745988114 - - Aldehyde dehydrogenase, putative [Ricinus communis]
17 Hb_003226_030 0.1750032367 - - sucrose synthase 5 [Hevea brasiliensis]
18 Hb_000095_070 0.175091102 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000597_080 0.1771456273 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
20 Hb_092029_010 0.177758478 - - Disease resistance protein RPM1, putative [Ricinus communis]

Gene co-expression network

sample Hb_002888_050 Hb_002888_050 Hb_002814_050 Hb_002814_050 Hb_002888_050--Hb_002814_050 Hb_006355_070 Hb_006355_070 Hb_002888_050--Hb_006355_070 Hb_002308_060 Hb_002308_060 Hb_002888_050--Hb_002308_060 Hb_001737_040 Hb_001737_040 Hb_002888_050--Hb_001737_040 Hb_004307_070 Hb_004307_070 Hb_002888_050--Hb_004307_070 Hb_003992_220 Hb_003992_220 Hb_002888_050--Hb_003992_220 Hb_000095_070 Hb_000095_070 Hb_002814_050--Hb_000095_070 Hb_000347_420 Hb_000347_420 Hb_002814_050--Hb_000347_420 Hb_002814_050--Hb_004307_070 Hb_007943_020 Hb_007943_020 Hb_002814_050--Hb_007943_020 Hb_116194_010 Hb_116194_010 Hb_002814_050--Hb_116194_010 Hb_000970_020 Hb_000970_020 Hb_002814_050--Hb_000970_020 Hb_038833_010 Hb_038833_010 Hb_006355_070--Hb_038833_010 Hb_006355_070--Hb_004307_070 Hb_000245_100 Hb_000245_100 Hb_006355_070--Hb_000245_100 Hb_003858_060 Hb_003858_060 Hb_006355_070--Hb_003858_060 Hb_002876_280 Hb_002876_280 Hb_006355_070--Hb_002876_280 Hb_001629_050 Hb_001629_050 Hb_006355_070--Hb_001629_050 Hb_002308_060--Hb_003992_220 Hb_000597_080 Hb_000597_080 Hb_002308_060--Hb_000597_080 Hb_001963_110 Hb_001963_110 Hb_002308_060--Hb_001963_110 Hb_170878_060 Hb_170878_060 Hb_002308_060--Hb_170878_060 Hb_001607_070 Hb_001607_070 Hb_002308_060--Hb_001607_070 Hb_092029_010 Hb_092029_010 Hb_002308_060--Hb_092029_010 Hb_001971_050 Hb_001971_050 Hb_001737_040--Hb_001971_050 Hb_000714_120 Hb_000714_120 Hb_001737_040--Hb_000714_120 Hb_000392_490 Hb_000392_490 Hb_001737_040--Hb_000392_490 Hb_005332_050 Hb_005332_050 Hb_001737_040--Hb_005332_050 Hb_002110_090 Hb_002110_090 Hb_001737_040--Hb_002110_090 Hb_001143_140 Hb_001143_140 Hb_004307_070--Hb_001143_140 Hb_004307_070--Hb_000347_420 Hb_004307_070--Hb_000095_070 Hb_009641_040 Hb_009641_040 Hb_004307_070--Hb_009641_040 Hb_000994_100 Hb_000994_100 Hb_004307_070--Hb_000994_100 Hb_003992_220--Hb_170878_060 Hb_167211_010 Hb_167211_010 Hb_003992_220--Hb_167211_010 Hb_001778_040 Hb_001778_040 Hb_003992_220--Hb_001778_040 Hb_001109_130 Hb_001109_130 Hb_003992_220--Hb_001109_130 Hb_003992_220--Hb_001963_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.92988 0.734574 3.14913 0.0503796 0.237696
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.196676 0 3.1766 4.08195

CAGE analysis