Hb_002851_040

Information

Type transcription factor
Description TF Family: zf-HD
Location Contig2851: 69203-70093
Sequence    

Annotation

kegg
ID pop:POPTR_0002s03660g
description POPTRDRAFT_551009; zinc finger family protein
nr
ID XP_012071869.1
description PREDICTED: zinc-finger homeodomain protein 5 [Jatropha curcas]
swissprot
ID Q9FRL5
description Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1
trembl
ID A0A067L339
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04439 PE=4 SV=1
Gene Ontology
ID GO:0003677
description zinc-finger homeodomain protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002851_040 0.0 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 5 [Jatropha curcas]
2 Hb_004079_090 0.1789692702 - - hypothetical protein RCOM_1053120 [Ricinus communis]
3 Hb_011457_120 0.186377205 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
4 Hb_059567_010 0.1911344944 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]
5 Hb_000020_040 0.1949363315 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
6 Hb_002811_220 0.2108390702 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
7 Hb_001347_030 0.2182976818 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_002942_150 0.2191348197 - - serine carboxypeptidase, putative [Ricinus communis]
9 Hb_004093_030 0.2294091015 - - hypothetical protein RCOM_1406750 [Ricinus communis]
10 Hb_000362_140 0.2320712084 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
11 Hb_103990_010 0.2350523472 - - PREDICTED: light-induced protein, chloroplastic-like [Nicotiana sylvestris]
12 Hb_000002_430 0.2352520411 - - PREDICTED: FHA domain-containing protein At4g14490 [Populus euphratica]
13 Hb_029432_010 0.2373881889 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_003935_090 0.240453593 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
15 Hb_000925_150 0.2405363608 - - PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
16 Hb_001266_150 0.2413379403 - - hypothetical protein JCGZ_14961 [Jatropha curcas]
17 Hb_007413_020 0.2418538452 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001755_040 0.245280743 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
19 Hb_000763_030 0.2495427676 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
20 Hb_012653_010 0.2501026138 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]

Gene co-expression network

sample Hb_002851_040 Hb_002851_040 Hb_004079_090 Hb_004079_090 Hb_002851_040--Hb_004079_090 Hb_011457_120 Hb_011457_120 Hb_002851_040--Hb_011457_120 Hb_059567_010 Hb_059567_010 Hb_002851_040--Hb_059567_010 Hb_000020_040 Hb_000020_040 Hb_002851_040--Hb_000020_040 Hb_002811_220 Hb_002811_220 Hb_002851_040--Hb_002811_220 Hb_001347_030 Hb_001347_030 Hb_002851_040--Hb_001347_030 Hb_004079_090--Hb_000020_040 Hb_000002_430 Hb_000002_430 Hb_004079_090--Hb_000002_430 Hb_001755_040 Hb_001755_040 Hb_004079_090--Hb_001755_040 Hb_000936_030 Hb_000936_030 Hb_004079_090--Hb_000936_030 Hb_002232_310 Hb_002232_310 Hb_004079_090--Hb_002232_310 Hb_003935_090 Hb_003935_090 Hb_004079_090--Hb_003935_090 Hb_002942_150 Hb_002942_150 Hb_011457_120--Hb_002942_150 Hb_011457_120--Hb_000020_040 Hb_011457_120--Hb_059567_010 Hb_004093_030 Hb_004093_030 Hb_011457_120--Hb_004093_030 Hb_000206_030 Hb_000206_030 Hb_011457_120--Hb_000206_030 Hb_001266_150 Hb_001266_150 Hb_011457_120--Hb_001266_150 Hb_059567_010--Hb_001266_150 Hb_000925_150 Hb_000925_150 Hb_059567_010--Hb_000925_150 Hb_001140_190 Hb_001140_190 Hb_059567_010--Hb_001140_190 Hb_000932_110 Hb_000932_110 Hb_059567_010--Hb_000932_110 Hb_000958_160 Hb_000958_160 Hb_059567_010--Hb_000958_160 Hb_000020_040--Hb_001755_040 Hb_000020_040--Hb_002232_310 Hb_011360_130 Hb_011360_130 Hb_000020_040--Hb_011360_130 Hb_014497_070 Hb_014497_070 Hb_000020_040--Hb_014497_070 Hb_002942_170 Hb_002942_170 Hb_002811_220--Hb_002942_170 Hb_002811_220--Hb_000002_430 Hb_000416_080 Hb_000416_080 Hb_002811_220--Hb_000416_080 Hb_003750_090 Hb_003750_090 Hb_002811_220--Hb_003750_090 Hb_000120_630 Hb_000120_630 Hb_002811_220--Hb_000120_630 Hb_002811_220--Hb_059567_010 Hb_000042_390 Hb_000042_390 Hb_001347_030--Hb_000042_390 Hb_001536_020 Hb_001536_020 Hb_001347_030--Hb_001536_020 Hb_010863_030 Hb_010863_030 Hb_001347_030--Hb_010863_030 Hb_000061_430 Hb_000061_430 Hb_001347_030--Hb_000061_430 Hb_029432_010 Hb_029432_010 Hb_001347_030--Hb_029432_010 Hb_007574_020 Hb_007574_020 Hb_001347_030--Hb_007574_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.03646 0 6.56544 2.9339 0.222326 0.51123
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.934868

CAGE analysis