Hb_002783_200

Information

Type -
Description -
Location Contig2783: 198897-201643
Sequence    

Annotation

kegg
ID pop:POPTR_0005s26110g
description POPTRDRAFT_652078; hypothetical protein
nr
ID XP_012073795.1
description PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXB9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08211 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002783_200 0.0 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
2 Hb_002235_190 0.1795900111 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005839_100 0.1836050428 - - PREDICTED: APO protein 1, chloroplastic isoform X3 [Jatropha curcas]
4 Hb_000244_280 0.2204839481 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X1 [Jatropha curcas]
5 Hb_000401_010 0.2277604976 - - SAB, putative [Ricinus communis]
6 Hb_007380_040 0.2322796525 - - receptor-kinase, putative [Ricinus communis]
7 Hb_000442_130 0.2338050375 - - conserved hypothetical protein [Ricinus communis]
8 Hb_030694_010 0.2345983708 - - PREDICTED: endoglucanase 25-like [Solanum tuberosum]
9 Hb_014834_020 0.2374786198 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
10 Hb_002093_050 0.2418230502 - - hypothetical protein POPTR_0008s02940g [Populus trichocarpa]
11 Hb_000130_060 0.2452691053 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
12 Hb_000106_020 0.2481045805 - - PREDICTED: protein TOPLESS isoform X1 [Jatropha curcas]
13 Hb_033772_070 0.2507937307 - - PREDICTED: uncharacterized protein LOC105633681 [Jatropha curcas]
14 Hb_003640_030 0.2510711432 - - PREDICTED: uncharacterized protein LOC105647345 isoform X1 [Jatropha curcas]
15 Hb_000362_110 0.2522033775 - - PREDICTED: uncharacterized protein LOC104612097 isoform X2 [Nelumbo nucifera]
16 Hb_001488_280 0.2526488509 - - hypothetical protein JCGZ_19947 [Jatropha curcas]
17 Hb_000235_050 0.2529330625 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001091_030 0.2532238764 - - hypothetical protein AALP_AA1G173500 [Arabis alpina]
19 Hb_001900_060 0.2552046472 - - PREDICTED: neutral alpha-glucosidase C [Jatropha curcas]
20 Hb_000061_380 0.2575829006 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002783_200 Hb_002783_200 Hb_002235_190 Hb_002235_190 Hb_002783_200--Hb_002235_190 Hb_005839_100 Hb_005839_100 Hb_002783_200--Hb_005839_100 Hb_000244_280 Hb_000244_280 Hb_002783_200--Hb_000244_280 Hb_000401_010 Hb_000401_010 Hb_002783_200--Hb_000401_010 Hb_007380_040 Hb_007380_040 Hb_002783_200--Hb_007380_040 Hb_000442_130 Hb_000442_130 Hb_002783_200--Hb_000442_130 Hb_002235_190--Hb_000401_010 Hb_002235_190--Hb_000244_280 Hb_000363_410 Hb_000363_410 Hb_002235_190--Hb_000363_410 Hb_001488_280 Hb_001488_280 Hb_002235_190--Hb_001488_280 Hb_002093_050 Hb_002093_050 Hb_002235_190--Hb_002093_050 Hb_000823_010 Hb_000823_010 Hb_002235_190--Hb_000823_010 Hb_048848_010 Hb_048848_010 Hb_005839_100--Hb_048848_010 Hb_007785_010 Hb_007785_010 Hb_005839_100--Hb_007785_010 Hb_003384_070 Hb_003384_070 Hb_005839_100--Hb_003384_070 Hb_001486_140 Hb_001486_140 Hb_005839_100--Hb_001486_140 Hb_001091_030 Hb_001091_030 Hb_005839_100--Hb_001091_030 Hb_004129_050 Hb_004129_050 Hb_000244_280--Hb_004129_050 Hb_000702_060 Hb_000702_060 Hb_000244_280--Hb_000702_060 Hb_002301_250 Hb_002301_250 Hb_000244_280--Hb_002301_250 Hb_006717_070 Hb_006717_070 Hb_000244_280--Hb_006717_070 Hb_003607_060 Hb_003607_060 Hb_000244_280--Hb_003607_060 Hb_000235_050 Hb_000235_050 Hb_000401_010--Hb_000235_050 Hb_003050_150 Hb_003050_150 Hb_000401_010--Hb_003050_150 Hb_000205_280 Hb_000205_280 Hb_000401_010--Hb_000205_280 Hb_000297_030 Hb_000297_030 Hb_000401_010--Hb_000297_030 Hb_002025_270 Hb_002025_270 Hb_000401_010--Hb_002025_270 Hb_004657_030 Hb_004657_030 Hb_007380_040--Hb_004657_030 Hb_000406_060 Hb_000406_060 Hb_007380_040--Hb_000406_060 Hb_000106_020 Hb_000106_020 Hb_007380_040--Hb_000106_020 Hb_003471_020 Hb_003471_020 Hb_007380_040--Hb_003471_020 Hb_000334_180 Hb_000334_180 Hb_007380_040--Hb_000334_180 Hb_004040_040 Hb_004040_040 Hb_007380_040--Hb_004040_040 Hb_002687_020 Hb_002687_020 Hb_000442_130--Hb_002687_020 Hb_000442_130--Hb_004657_030 Hb_000442_130--Hb_002093_050 Hb_017559_010 Hb_017559_010 Hb_000442_130--Hb_017559_010 Hb_000220_080 Hb_000220_080 Hb_000442_130--Hb_000220_080 Hb_001619_030 Hb_001619_030 Hb_000442_130--Hb_001619_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.837146 1.12982 1.55199 1.90844 1.02869 0.955792
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.11894 0.221493

CAGE analysis