Hb_002213_050

Information

Type -
Description -
Location Contig2213: 67997-71544
Sequence    

Annotation

kegg
ID sot:102595715
description uncharacterized LOC102595715
nr
ID XP_012067507.1
description PREDICTED: uncharacterized protein LOC105630318 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID K4BLJ7
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g116950.1 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002213_050 0.0 - - PREDICTED: uncharacterized protein LOC105630318 isoform X3 [Jatropha curcas]
2 Hb_004374_040 0.1092431136 - - PREDICTED: beta-carotene 3-hydroxylase, chloroplastic-like [Jatropha curcas]
3 Hb_002053_170 0.1253923858 - - cytochrome P450, putative [Ricinus communis]
4 Hb_004785_170 0.1286789375 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
5 Hb_003126_120 0.1535496274 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
6 Hb_000046_390 0.1589355981 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
7 Hb_000152_520 0.1696479278 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
8 Hb_034688_030 0.1739827217 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
9 Hb_011314_010 0.1740996798 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
10 Hb_037684_010 0.1744961052 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
11 Hb_000638_230 0.177811308 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
12 Hb_008948_010 0.1783595727 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
13 Hb_010217_020 0.1787884752 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
14 Hb_002000_100 0.1862558904 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
15 Hb_142056_010 0.1863859543 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
16 Hb_001131_050 0.1864766649 - - hypothetical protein EUGRSUZ_C02968 [Eucalyptus grandis]
17 Hb_011985_020 0.1885379714 - - PREDICTED: phospholipase A1-Igamma3, chloroplastic [Jatropha curcas]
18 Hb_005736_110 0.1912723067 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
19 Hb_003589_100 0.1927213042 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
20 Hb_000453_290 0.1929602131 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]

Gene co-expression network

sample Hb_002213_050 Hb_002213_050 Hb_004374_040 Hb_004374_040 Hb_002213_050--Hb_004374_040 Hb_002053_170 Hb_002053_170 Hb_002213_050--Hb_002053_170 Hb_004785_170 Hb_004785_170 Hb_002213_050--Hb_004785_170 Hb_003126_120 Hb_003126_120 Hb_002213_050--Hb_003126_120 Hb_000046_390 Hb_000046_390 Hb_002213_050--Hb_000046_390 Hb_000152_520 Hb_000152_520 Hb_002213_050--Hb_000152_520 Hb_004374_040--Hb_004785_170 Hb_011314_010 Hb_011314_010 Hb_004374_040--Hb_011314_010 Hb_011985_020 Hb_011985_020 Hb_004374_040--Hb_011985_020 Hb_000563_570 Hb_000563_570 Hb_004374_040--Hb_000563_570 Hb_009225_070 Hb_009225_070 Hb_004374_040--Hb_009225_070 Hb_037684_010 Hb_037684_010 Hb_002053_170--Hb_037684_010 Hb_002808_010 Hb_002808_010 Hb_002053_170--Hb_002808_010 Hb_001131_050 Hb_001131_050 Hb_002053_170--Hb_001131_050 Hb_020817_030 Hb_020817_030 Hb_002053_170--Hb_020817_030 Hb_016564_050 Hb_016564_050 Hb_002053_170--Hb_016564_050 Hb_008948_010 Hb_008948_010 Hb_004785_170--Hb_008948_010 Hb_004785_170--Hb_011985_020 Hb_000468_050 Hb_000468_050 Hb_004785_170--Hb_000468_050 Hb_004785_170--Hb_011314_010 Hb_001318_230 Hb_001318_230 Hb_004785_170--Hb_001318_230 Hb_034688_030 Hb_034688_030 Hb_003126_120--Hb_034688_030 Hb_002000_100 Hb_002000_100 Hb_003126_120--Hb_002000_100 Hb_022693_090 Hb_022693_090 Hb_003126_120--Hb_022693_090 Hb_003126_120--Hb_011314_010 Hb_001360_020 Hb_001360_020 Hb_003126_120--Hb_001360_020 Hb_000367_320 Hb_000367_320 Hb_003126_120--Hb_000367_320 Hb_025161_060 Hb_025161_060 Hb_000046_390--Hb_025161_060 Hb_000638_230 Hb_000638_230 Hb_000046_390--Hb_000638_230 Hb_001454_350 Hb_001454_350 Hb_000046_390--Hb_001454_350 Hb_025557_070 Hb_025557_070 Hb_000046_390--Hb_025557_070 Hb_025557_080 Hb_025557_080 Hb_000046_390--Hb_025557_080 Hb_001019_030 Hb_001019_030 Hb_000046_390--Hb_001019_030 Hb_000856_030 Hb_000856_030 Hb_000152_520--Hb_000856_030 Hb_000317_170 Hb_000317_170 Hb_000152_520--Hb_000317_170 Hb_011224_150 Hb_011224_150 Hb_000152_520--Hb_011224_150 Hb_000928_200 Hb_000928_200 Hb_000152_520--Hb_000928_200 Hb_000152_520--Hb_003126_120 Hb_000152_520--Hb_011985_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.118306 0 0.354215 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0396533 0.0990821

CAGE analysis