Hb_008948_010

Information

Type -
Description -
Location Contig8948: 8375-9810
Sequence    

Annotation

kegg
ID rcu:RCOM_1075940
description nucleoside transporter, putative
nr
ID XP_012078808.1
description PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
swissprot
ID Q84XI3
description Equilibrative nucleotide transporter 8 OS=Arabidopsis thaliana GN=ETN8 PE=2 SV=1
trembl
ID B9SMI4
description Nucleoside transporter, putative OS=Ricinus communis GN=RCOM_1075940 PE=4 SV=1
Gene Ontology
ID GO:0006810
description equilibrative nucleotide transporter 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008948_010 0.0 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
2 Hb_004785_170 0.0880555437 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
3 Hb_005391_050 0.0956113056 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
4 Hb_002598_020 0.1081968435 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]
5 Hb_011985_020 0.1100822211 - - PREDICTED: phospholipase A1-Igamma3, chloroplastic [Jatropha curcas]
6 Hb_004450_090 0.1112995647 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
7 Hb_000816_150 0.1113378411 - - oligopeptide transporter, putative [Ricinus communis]
8 Hb_030949_010 0.1164965094 - - hypothetical protein POPTR_0001s24140g [Populus trichocarpa]
9 Hb_180980_010 0.1177768245 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Malus domestica]
10 Hb_000384_020 0.1211586013 - - sucrose phosphate syntase, putative [Ricinus communis]
11 Hb_000983_130 0.1216872149 - - transcription factor, putative [Ricinus communis]
12 Hb_027892_050 0.1219210831 - - hypothetical protein PHAVU_009G226400g [Phaseolus vulgaris]
13 Hb_029791_010 0.1231602914 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
14 Hb_001318_230 0.1267523528 - - Boron transporter, putative [Ricinus communis]
15 Hb_026144_040 0.1310683675 - - -
16 Hb_009771_040 0.1325421954 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
17 Hb_173107_020 0.1332179435 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
18 Hb_114733_010 0.1334929578 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
19 Hb_017700_030 0.1339881782 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
20 Hb_000856_030 0.1354552299 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_008948_010 Hb_008948_010 Hb_004785_170 Hb_004785_170 Hb_008948_010--Hb_004785_170 Hb_005391_050 Hb_005391_050 Hb_008948_010--Hb_005391_050 Hb_002598_020 Hb_002598_020 Hb_008948_010--Hb_002598_020 Hb_011985_020 Hb_011985_020 Hb_008948_010--Hb_011985_020 Hb_004450_090 Hb_004450_090 Hb_008948_010--Hb_004450_090 Hb_000816_150 Hb_000816_150 Hb_008948_010--Hb_000816_150 Hb_004374_040 Hb_004374_040 Hb_004785_170--Hb_004374_040 Hb_004785_170--Hb_011985_020 Hb_000468_050 Hb_000468_050 Hb_004785_170--Hb_000468_050 Hb_011314_010 Hb_011314_010 Hb_004785_170--Hb_011314_010 Hb_001318_230 Hb_001318_230 Hb_004785_170--Hb_001318_230 Hb_000023_180 Hb_000023_180 Hb_005391_050--Hb_000023_180 Hb_142056_010 Hb_142056_010 Hb_005391_050--Hb_142056_010 Hb_002835_070 Hb_002835_070 Hb_005391_050--Hb_002835_070 Hb_001131_050 Hb_001131_050 Hb_005391_050--Hb_001131_050 Hb_001976_100 Hb_001976_100 Hb_005391_050--Hb_001976_100 Hb_000537_090 Hb_000537_090 Hb_002598_020--Hb_000537_090 Hb_026144_040 Hb_026144_040 Hb_002598_020--Hb_026144_040 Hb_000162_070 Hb_000162_070 Hb_002598_020--Hb_000162_070 Hb_000090_020 Hb_000090_020 Hb_002598_020--Hb_000090_020 Hb_008598_010 Hb_008598_010 Hb_002598_020--Hb_008598_010 Hb_002598_020--Hb_001318_230 Hb_011985_020--Hb_000816_150 Hb_017700_030 Hb_017700_030 Hb_011985_020--Hb_017700_030 Hb_011985_020--Hb_004450_090 Hb_114733_010 Hb_114733_010 Hb_011985_020--Hb_114733_010 Hb_000983_130 Hb_000983_130 Hb_004450_090--Hb_000983_130 Hb_002534_070 Hb_002534_070 Hb_004450_090--Hb_002534_070 Hb_061783_010 Hb_061783_010 Hb_004450_090--Hb_061783_010 Hb_004102_200 Hb_004102_200 Hb_004450_090--Hb_004102_200 Hb_029238_040 Hb_029238_040 Hb_004450_090--Hb_029238_040 Hb_000000_260 Hb_000000_260 Hb_004450_090--Hb_000000_260 Hb_000384_020 Hb_000384_020 Hb_000816_150--Hb_000384_020 Hb_000816_150--Hb_000468_050 Hb_000816_150--Hb_114733_010 Hb_000816_150--Hb_017700_030 Hb_009225_070 Hb_009225_070 Hb_000816_150--Hb_009225_070 Hb_000991_080 Hb_000991_080 Hb_000816_150--Hb_000991_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.136292 0.032511 0.320693 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0299948 0.143143

CAGE analysis